Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CD248Q9HCU0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.64■□□□□ 0.25
CD248Q9HCU0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.64■□□□□ 0.25
CD248Q9HCU0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.64■□□□□ 0.25
CD248Q9HCU0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.64■□□□□ 0.25
CD248Q9HCU0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.64■□□□□ 0.25
CD248Q9HCU0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.64■□□□□ 0.25
CD248Q9HCU0 AL035456.1-201ENST00000456064 1369 ntBASIC16.64■□□□□ 0.25
CD248Q9HCU0 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CD248Q9HCU0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.63■□□□□ 0.25
CD248Q9HCU0 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CD248Q9HCU0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.63■□□□□ 0.25
CD248Q9HCU0 AC098859.1-201ENST00000502915 1238 ntBASIC16.63■□□□□ 0.25
CD248Q9HCU0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.63■□□□□ 0.25
CD248Q9HCU0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.63■□□□□ 0.25
CD248Q9HCU0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.63■□□□□ 0.25
CD248Q9HCU0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.63■□□□□ 0.25
CD248Q9HCU0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.63■□□□□ 0.25
CD248Q9HCU0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.63■□□□□ 0.25
CD248Q9HCU0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.63■□□□□ 0.25
CD248Q9HCU0 AL133215.2-201ENST00000609242 977 ntBASIC16.63■□□□□ 0.25
CD248Q9HCU0 AC009118.2-201ENST00000613275 655 ntBASIC16.63■□□□□ 0.25
CD248Q9HCU0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.63■□□□□ 0.25
CD248Q9HCU0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.63■□□□□ 0.25
CD248Q9HCU0 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD248Q9HCU0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD248Q9HCU0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD248Q9HCU0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 AC005840.4-201ENST00000541242 2494 ntBASIC16.62■□□□□ 0.25
CD248Q9HCU0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD248Q9HCU0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD248Q9HCU0 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD248Q9HCU0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD248Q9HCU0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD248Q9HCU0 RPL37AP1-201ENST00000412502 279 ntBASIC16.62■□□□□ 0.25
CD248Q9HCU0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD248Q9HCU0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD248Q9HCU0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD248Q9HCU0 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD248Q9HCU0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD248Q9HCU0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD248Q9HCU0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD248Q9HCU0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD248Q9HCU0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD248Q9HCU0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD248Q9HCU0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD248Q9HCU0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CD248Q9HCU0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.61■□□□□ 0.25
CD248Q9HCU0 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD248Q9HCU0 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 270.4 ms