Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 AL645933.1-201ENST00000440087 609 ntBASIC14.28□□□□□ -0.12
CHD8Q9HCK8 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 AL451007.2-201ENST00000632004 563 ntBASIC14.28□□□□□ -0.12
CHD8Q9HCK8 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 AC090502.4-201ENST00000551714 1386 ntBASIC14.28□□□□□ -0.12
CHD8Q9HCK8 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.28□□□□□ -0.12
CHD8Q9HCK8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHD8Q9HCK8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHD8Q9HCK8 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CHD8Q9HCK8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHD8Q9HCK8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CHD8Q9HCK8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CHD8Q9HCK8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHD8Q9HCK8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHD8Q9HCK8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHD8Q9HCK8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CHD8Q9HCK8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
CHD8Q9HCK8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHD8Q9HCK8 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 AC114812.1-204ENST00000449669 728 ntBASIC14.27□□□□□ -0.13
CHD8Q9HCK8 AC010900.1-201ENST00000449849 1296 ntBASIC14.27□□□□□ -0.13
CHD8Q9HCK8 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 AP000911.2-201ENST00000534330 502 ntBASIC14.27□□□□□ -0.13
CHD8Q9HCK8 AC027237.1-201ENST00000560942 655 ntBASIC14.27□□□□□ -0.13
CHD8Q9HCK8 RN7SL470P-201ENST00000583069 259 ntBASIC14.27□□□□□ -0.13
CHD8Q9HCK8 AC005041.3-201ENST00000606287 649 ntBASIC14.27□□□□□ -0.13
CHD8Q9HCK8 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 AC134407.2-201ENST00000625089 1978 ntBASIC14.27□□□□□ -0.13
CHD8Q9HCK8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 AL138688.1-201ENST00000624851 1594 ntBASIC14.27□□□□□ -0.13
CHD8Q9HCK8 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 RBPMSLP-201ENST00000433427 502 ntBASIC14.27□□□□□ -0.13
CHD8Q9HCK8 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 GDNF-207ENST00000515058 764 ntTSL 5 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 AC090857.1-201ENST00000527400 390 ntBASIC14.27□□□□□ -0.13
CHD8Q9HCK8 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC14.27□□□□□ -0.13
CHD8Q9HCK8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 AC009093.2-202ENST00000620513 2079 ntBASIC14.26□□□□□ -0.13
CHD8Q9HCK8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.26□□□□□ -0.13
CHD8Q9HCK8 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms