Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 CD70-202ENST00000423145 881 ntTSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 SPDYE15P-201ENST00000424157 909 ntBASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 LIN28AP1-201ENST00000429574 405 ntBASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 ARL4AP4-201ENST00000434170 518 ntBASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 ATP5G1P1-201ENST00000448724 379 ntBASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AC090192.1-201ENST00000517740 490 ntBASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 CD99P1-205ENST00000527459 561 ntBASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AC005336.2-201ENST00000593183 939 ntBASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 FGF14-AS2-201ENST00000606448 1074 ntBASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 ITM2C-210ENST00000620962 501 ntBASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AL138966.2-201ENST00000621997 464 ntBASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 DDX27-201ENST00000371764 2643 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.73
LCE3DQ9BYE3 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.73
LCE3DQ9BYE3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC4.28□□□□□ -1.73
LCE3DQ9BYE3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms