Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 UGT1A2P-201ENST00000454886 866 ntBASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 AL365330.1-201ENST00000607459 531 ntBASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.29□□□□□ -0.28
PCGF1Q9BSM1 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 AC236430.1-201ENST00000402231 743 ntBASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
PCGF1Q9BSM1 BANF1P1-201ENST00000553684 263 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms