Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC10.48□□□□□ -0.73
LITAFQ99732 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC10.48□□□□□ -0.73
LITAFQ99732 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC10.48□□□□□ -0.73
LITAFQ99732 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 BNIP3P1-202ENST00000550043 1585 ntBASIC10.48□□□□□ -0.73
LITAFQ99732 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC10.48□□□□□ -0.73
LITAFQ99732 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC10.48□□□□□ -0.73
LITAFQ99732 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC10.48□□□□□ -0.73
LITAFQ99732 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LITAFQ99732 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LITAFQ99732 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
LITAFQ99732 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LITAFQ99732 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
LITAFQ99732 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
LITAFQ99732 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC10.48□□□□□ -0.73
LITAFQ99732 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
LITAFQ99732 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
LITAFQ99732 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC10.48□□□□□ -0.73
LITAFQ99732 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC10.48□□□□□ -0.73
LITAFQ99732 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC10.48□□□□□ -0.73
LITAFQ99732 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
LITAFQ99732 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC10.48□□□□□ -0.73
LITAFQ99732 AL139288.1-201ENST00000623748 933 ntBASIC10.48□□□□□ -0.73
LITAFQ99732 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC10.48□□□□□ -0.73
LITAFQ99732 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LITAFQ99732 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC10.48□□□□□ -0.73
LITAFQ99732 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC10.48□□□□□ -0.73
LITAFQ99732 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LITAFQ99732 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC10.48□□□□□ -0.73
LITAFQ99732 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
LITAFQ99732 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
LITAFQ99732 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LITAFQ99732 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
LITAFQ99732 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
LITAFQ99732 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LITAFQ99732 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC10.47□□□□□ -0.73
LITAFQ99732 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
LITAFQ99732 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC10.47□□□□□ -0.73
LITAFQ99732 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC10.47□□□□□ -0.73
LITAFQ99732 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC10.47□□□□□ -0.73
LITAFQ99732 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC10.47□□□□□ -0.73
LITAFQ99732 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC10.47□□□□□ -0.73
LITAFQ99732 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC10.47□□□□□ -0.73
LITAFQ99732 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC10.47□□□□□ -0.73
LITAFQ99732 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
LITAFQ99732 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC10.47□□□□□ -0.73
LITAFQ99732 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
LITAFQ99732 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
LITAFQ99732 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC10.47□□□□□ -0.73
LITAFQ99732 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC10.47□□□□□ -0.73
LITAFQ99732 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
LITAFQ99732 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LITAFQ99732 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC10.47□□□□□ -0.73
LITAFQ99732 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC10.47□□□□□ -0.73
LITAFQ99732 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC10.47□□□□□ -0.73
LITAFQ99732 PMS2P4-201ENST00000412466 1052 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms