Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD9AQ99638 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD9AQ99638 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD9AQ99638 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.64■□□□□ 0.25
RAD9AQ99638 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.64■□□□□ 0.25
RAD9AQ99638 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAD9AQ99638 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD9AQ99638 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD9AQ99638 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD9AQ99638 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD9AQ99638 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD9AQ99638 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RAD9AQ99638 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RAD9AQ99638 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.64■□□□□ 0.25
RAD9AQ99638 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAD9AQ99638 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.64■□□□□ 0.25
RAD9AQ99638 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.64■□□□□ 0.25
RAD9AQ99638 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.64■□□□□ 0.25
RAD9AQ99638 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.64■□□□□ 0.25
RAD9AQ99638 AL133466.1-201ENST00000447582 150 ntBASIC16.64■□□□□ 0.25
RAD9AQ99638 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.64■□□□□ 0.25
RAD9AQ99638 TMEM198B-204ENST00000484016 896 ntBASIC16.64■□□□□ 0.25
RAD9AQ99638 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.64■□□□□ 0.25
RAD9AQ99638 IMP3P2-201ENST00000489760 475 ntBASIC16.64■□□□□ 0.25
RAD9AQ99638 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAD9AQ99638 AC245884.6-201ENST00000515672 1067 ntBASIC16.64■□□□□ 0.25
RAD9AQ99638 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.64■□□□□ 0.25
RAD9AQ99638 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.64■□□□□ 0.25
RAD9AQ99638 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.64■□□□□ 0.25
RAD9AQ99638 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.64■□□□□ 0.25
RAD9AQ99638 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RAD9AQ99638 AC097724.1-201ENST00000609581 426 ntBASIC16.64■□□□□ 0.25
RAD9AQ99638 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.64■□□□□ 0.25
RAD9AQ99638 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.64■□□□□ 0.25
RAD9AQ99638 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD9AQ99638 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RAD9AQ99638 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAD9AQ99638 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD9AQ99638 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
RAD9AQ99638 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD9AQ99638 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.64■□□□□ 0.25
RAD9AQ99638 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RAD9AQ99638 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD9AQ99638 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RAD9AQ99638 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD9AQ99638 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.63■□□□□ 0.25
RAD9AQ99638 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
RAD9AQ99638 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAD9AQ99638 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD9AQ99638 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.63■□□□□ 0.25
RAD9AQ99638 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.63■□□□□ 0.25
RAD9AQ99638 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAD9AQ99638 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD9AQ99638 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD9AQ99638 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.63■□□□□ 0.25
RAD9AQ99638 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.63■□□□□ 0.25
RAD9AQ99638 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
RAD9AQ99638 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.63■□□□□ 0.25
RAD9AQ99638 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAD9AQ99638 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.63■□□□□ 0.25
RAD9AQ99638 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.63■□□□□ 0.25
RAD9AQ99638 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.63■□□□□ 0.25
RAD9AQ99638 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAD9AQ99638 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
RAD9AQ99638 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.63■□□□□ 0.25
RAD9AQ99638 RN7SL720P-201ENST00000488178 304 ntBASIC16.63■□□□□ 0.25
RAD9AQ99638 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.63■□□□□ 0.25
RAD9AQ99638 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAD9AQ99638 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.63■□□□□ 0.25
RAD9AQ99638 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAD9AQ99638 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.63■□□□□ 0.25
RAD9AQ99638 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.63■□□□□ 0.25
RAD9AQ99638 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.63■□□□□ 0.25
RAD9AQ99638 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
RAD9AQ99638 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD9AQ99638 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD9AQ99638 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD9AQ99638 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD9AQ99638 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD9AQ99638 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.63■□□□□ 0.25
RAD9AQ99638 AC106820.2-201ENST00000563775 3264 ntBASIC16.63■□□□□ 0.25
RAD9AQ99638 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.63■□□□□ 0.25
RAD9AQ99638 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAD9AQ99638 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAD9AQ99638 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAD9AQ99638 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAD9AQ99638 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.62■□□□□ 0.25
RAD9AQ99638 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAD9AQ99638 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.62■□□□□ 0.25
RAD9AQ99638 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.62■□□□□ 0.25
RAD9AQ99638 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
RAD9AQ99638 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
RAD9AQ99638 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.62■□□□□ 0.25
RAD9AQ99638 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.62■□□□□ 0.25
RAD9AQ99638 AL008707.1-201ENST00000422498 534 ntBASIC16.62■□□□□ 0.25
RAD9AQ99638 NKAIN1P1-201ENST00000435754 582 ntBASIC16.62■□□□□ 0.25
RAD9AQ99638 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAD9AQ99638 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.62■□□□□ 0.25
RAD9AQ99638 SERPINA13P-202ENST00000478994 924 ntBASIC16.62■□□□□ 0.25
RAD9AQ99638 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms