Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 AC055811.4-201ENST00000624039 1754 ntBASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 RN7SKP175-201ENST00000408472 289 ntBASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 AL354877.1-201ENST00000424412 413 ntBASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDK5RAP2Q96SN8 AC087481.3-201ENST00000602886 1894 ntBASIC18.15■□□□□ 0.5
CDK5RAP2Q96SN8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CDK5RAP2Q96SN8 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK5RAP2Q96SN8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK5RAP2Q96SN8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK5RAP2Q96SN8 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.15■□□□□ 0.5
CDK5RAP2Q96SN8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.15■□□□□ 0.5
CDK5RAP2Q96SN8 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDK5RAP2Q96SN8 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.15■□□□□ 0.5
CDK5RAP2Q96SN8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.15■□□□□ 0.5
CDK5RAP2Q96SN8 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.15■□□□□ 0.5
CDK5RAP2Q96SN8 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.15■□□□□ 0.5
CDK5RAP2Q96SN8 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.15■□□□□ 0.5
CDK5RAP2Q96SN8 ENPP7P14-201ENST00000621765 1040 ntBASIC18.15■□□□□ 0.5
CDK5RAP2Q96SN8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK5RAP2Q96SN8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CDK5RAP2Q96SN8 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK5RAP2Q96SN8 CLUHP2-201ENST00000426660 1303 ntBASIC18.14■□□□□ 0.5
CDK5RAP2Q96SN8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDK5RAP2Q96SN8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CDK5RAP2Q96SN8 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDK5RAP2Q96SN8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDK5RAP2Q96SN8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 MIR4783-201ENST00000580343 82 ntBASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 RN7SL219P-201ENST00000582872 296 ntBASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 AL359258.3-201ENST00000622910 2331 ntBASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 AC079178.1-201ENST00000420915 656 ntBASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 NUS1P3-201ENST00000423502 862 ntBASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDK5RAP2Q96SN8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 GOLGA2P4-201ENST00000441462 777 ntBASIC18.13■□□□□ 0.49
CDK5RAP2Q96SN8 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms