Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 PRYP5-201ENST00000451909 266 ntBASIC12□□□□□ -0.49
AP1S3Q96PC3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC12□□□□□ -0.49
AP1S3Q96PC3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12□□□□□ -0.49
AP1S3Q96PC3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12□□□□□ -0.49
AP1S3Q96PC3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12□□□□□ -0.49
AP1S3Q96PC3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12□□□□□ -0.49
AP1S3Q96PC3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12□□□□□ -0.49
AP1S3Q96PC3 AF228730.7-201ENST00000641842 219 ntBASIC12□□□□□ -0.49
AP1S3Q96PC3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
AP1S3Q96PC3 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12□□□□□ -0.49
AP1S3Q96PC3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12□□□□□ -0.49
AP1S3Q96PC3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12□□□□□ -0.49
AP1S3Q96PC3 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12□□□□□ -0.49
AP1S3Q96PC3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12□□□□□ -0.49
AP1S3Q96PC3 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12□□□□□ -0.49
AP1S3Q96PC3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
AP1S3Q96PC3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
AP1S3Q96PC3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12□□□□□ -0.49
AP1S3Q96PC3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12□□□□□ -0.49
AP1S3Q96PC3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 PAWRP1-201ENST00000451083 565 ntBASIC11.99□□□□□ -0.49
AP1S3Q96PC3 AC087163.2-201ENST00000457299 853 ntBASIC11.99□□□□□ -0.49
AP1S3Q96PC3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 BX005266.1-201ENST00000473402 457 ntBASIC11.99□□□□□ -0.49
AP1S3Q96PC3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 CYP2A7P1-201ENST00000595391 815 ntBASIC11.99□□□□□ -0.49
AP1S3Q96PC3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 AL139288.1-201ENST00000623748 933 ntBASIC11.99□□□□□ -0.49
AP1S3Q96PC3 AC066615.1-201ENST00000640911 628 ntBASIC11.99□□□□□ -0.49
AP1S3Q96PC3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AP1S3Q96PC3 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 AC007191.1-201ENST00000623179 2995 ntBASIC11.98□□□□□ -0.49
AP1S3Q96PC3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms