Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL21A1Q96P44 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.95□□□□□ -0.02
COL21A1Q96P44 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.94□□□□□ -0.02
COL21A1Q96P44 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
COL21A1Q96P44 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.94□□□□□ -0.02
COL21A1Q96P44 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.94□□□□□ -0.02
COL21A1Q96P44 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
COL21A1Q96P44 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.94□□□□□ -0.02
COL21A1Q96P44 AL353705.2-201ENST00000428243 662 ntBASIC14.94□□□□□ -0.02
COL21A1Q96P44 METTL21AP1-201ENST00000438852 635 ntBASIC14.94□□□□□ -0.02
COL21A1Q96P44 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 AC109322.1-201ENST00000524499 1264 ntBASIC14.94□□□□□ -0.02
COL21A1Q96P44 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.94□□□□□ -0.02
COL21A1Q96P44 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
COL21A1Q96P44 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.94□□□□□ -0.02
COL21A1Q96P44 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
COL21A1Q96P44 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.94□□□□□ -0.02
COL21A1Q96P44 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.94□□□□□ -0.02
COL21A1Q96P44 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
COL21A1Q96P44 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
COL21A1Q96P44 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL21A1Q96P44 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.94□□□□□ -0.02
COL21A1Q96P44 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.93□□□□□ -0.02
COL21A1Q96P44 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL21A1Q96P44 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.93□□□□□ -0.02
COL21A1Q96P44 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
COL21A1Q96P44 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL21A1Q96P44 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL21A1Q96P44 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.93□□□□□ -0.02
COL21A1Q96P44 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.93□□□□□ -0.02
COL21A1Q96P44 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL21A1Q96P44 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL21A1Q96P44 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL21A1Q96P44 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL21A1Q96P44 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL21A1Q96P44 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
COL21A1Q96P44 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL21A1Q96P44 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL21A1Q96P44 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL21A1Q96P44 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.93□□□□□ -0.02
COL21A1Q96P44 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.93□□□□□ -0.02
COL21A1Q96P44 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.93□□□□□ -0.02
COL21A1Q96P44 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.93□□□□□ -0.02
COL21A1Q96P44 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.93□□□□□ -0.02
COL21A1Q96P44 AC003101.2-201ENST00000612557 442 ntBASIC14.93□□□□□ -0.02
COL21A1Q96P44 MIR6080-201ENST00000617359 66 ntBASIC14.93□□□□□ -0.02
COL21A1Q96P44 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.93□□□□□ -0.02
COL21A1Q96P44 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.93□□□□□ -0.02
COL21A1Q96P44 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
COL21A1Q96P44 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.93□□□□□ -0.02
COL21A1Q96P44 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL21A1Q96P44 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
COL21A1Q96P44 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.93□□□□□ -0.02
COL21A1Q96P44 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL21A1Q96P44 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL21A1Q96P44 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL21A1Q96P44 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL21A1Q96P44 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.93□□□□□ -0.02
COL21A1Q96P44 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
COL21A1Q96P44 TMBIM7P-203ENST00000641617 1718 ntBASIC14.92□□□□□ -0.02
COL21A1Q96P44 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL21A1Q96P44 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms