Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NKX2-3Q8TAU0 PPT1-215ENST00000641471 2368 ntBASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 AC138932.1-201ENST00000534164 6830 ntBASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 CROCCP4-201ENST00000457096 498 ntBASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.5■□□□□ 0.55
NKX2-3Q8TAU0 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 ANKRD19P-201ENST00000338192 862 ntBASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 RARRES2P5-201ENST00000564013 466 ntBASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 WFDC1-204ENST00000613603 549 ntBASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 RPSAP52-203ENST00000622976 1023 ntBASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 SSR4P1-203ENST00000599569 2260 ntBASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NKX2-3Q8TAU0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NKX2-3Q8TAU0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.48■□□□□ 0.55
NKX2-3Q8TAU0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX2-3Q8TAU0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX2-3Q8TAU0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX2-3Q8TAU0 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX2-3Q8TAU0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX2-3Q8TAU0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NKX2-3Q8TAU0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
NKX2-3Q8TAU0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX2-3Q8TAU0 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
NKX2-3Q8TAU0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NKX2-3Q8TAU0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX2-3Q8TAU0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX2-3Q8TAU0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms