Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 AC011467.4-201ENST00000594891 528 ntBASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 AC008738.7-201ENST00000609744 511 ntBASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC148Q8NFR7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 MRPS18AP1-201ENST00000414458 589 ntBASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 AC015922.1-201ENST00000421102 1152 ntBASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 RPL13P2-201ENST00000440687 659 ntBASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 AC135586.1-201ENST00000539323 574 ntBASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 AJ011932.1-201ENST00000621707 465 ntBASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC148Q8NFR7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC148Q8NFR7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.14■□□□□ 0.5
CCDC148Q8NFR7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC148Q8NFR7 CICP13-201ENST00000422015 2789 ntBASIC18.14■□□□□ 0.5
CCDC148Q8NFR7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 AC092337.1-201ENST00000568699 1129 ntBASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 LINC01115-203ENST00000606068 577 ntBASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 AC004461.2-201ENST00000629517 803 ntBASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms