Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 TNRC18P3-201ENST00000441896 2691 ntBASIC16.6■□□□□ 0.25
TTC16Q8NEE8 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TTC16Q8NEE8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.6■□□□□ 0.25
TTC16Q8NEE8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.6■□□□□ 0.25
TTC16Q8NEE8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 ME2P1-201ENST00000426028 1970 ntBASIC16.59■□□□□ 0.25
TTC16Q8NEE8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 CTBP2P3-201ENST00000585629 1255 ntBASIC16.59■□□□□ 0.25
TTC16Q8NEE8 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 BNIP3P1-202ENST00000550043 1585 ntBASIC16.59■□□□□ 0.25
TTC16Q8NEE8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.59■□□□□ 0.25
TTC16Q8NEE8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
TTC16Q8NEE8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TTC16Q8NEE8 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TTC16Q8NEE8 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TTC16Q8NEE8 PCDHB19P-201ENST00000570871 2371 ntBASIC16.58■□□□□ 0.25
TTC16Q8NEE8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TTC16Q8NEE8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
TTC16Q8NEE8 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 AC098850.1-201ENST00000419919 790 ntBASIC16.58■□□□□ 0.24
TTC16Q8NEE8 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 HIST3H2BA-201ENST00000436555 524 ntBASIC16.58■□□□□ 0.24
TTC16Q8NEE8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 KRT8P37-201ENST00000451609 1420 ntBASIC16.58■□□□□ 0.24
TTC16Q8NEE8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.58■□□□□ 0.24
TTC16Q8NEE8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TTC16Q8NEE8 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC16Q8NEE8 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TTC16Q8NEE8 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.57■□□□□ 0.24
TTC16Q8NEE8 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TTC16Q8NEE8 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.57■□□□□ 0.24
TTC16Q8NEE8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TTC16Q8NEE8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC16Q8NEE8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TTC16Q8NEE8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.57■□□□□ 0.24
TTC16Q8NEE8 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms