Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB42Q8N4Z0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB42Q8N4Z0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.35■□□□□ 0.05
RAB42Q8N4Z0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB42Q8N4Z0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB42Q8N4Z0 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB42Q8N4Z0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RAB42Q8N4Z0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB42Q8N4Z0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB42Q8N4Z0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB42Q8N4Z0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RAB42Q8N4Z0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB42Q8N4Z0 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 AC135586.1-201ENST00000539323 574 ntBASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 AC044860.1-202ENST00000559481 777 ntBASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 AC009118.2-201ENST00000613275 655 ntBASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB42Q8N4Z0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB42Q8N4Z0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.33■□□□□ 0.05
RAB42Q8N4Z0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB42Q8N4Z0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB42Q8N4Z0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB42Q8N4Z0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.33■□□□□ 0.05
RAB42Q8N4Z0 AL607033.1-201ENST00000623900 1599 ntBASIC15.33■□□□□ 0.05
RAB42Q8N4Z0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 AC097359.3-201ENST00000603982 1210 ntBASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB42Q8N4Z0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms