Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 AC069224.1-201ENST00000566372 1715 ntBASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 AC018695.7-201ENST00000624587 2492 ntBASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.7■□□□□ 0.26
NPAS4Q8IUM7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 AP006547.1-201ENST00000563435 692 ntBASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 AC244452.3-201ENST00000636814 210 ntBASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 PRSS30P-206ENST00000641773 873 ntBASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 AL354989.2-201ENST00000435838 1540 ntBASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 AC092364.2-201ENST00000596710 2692 ntBASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 CROCCP1-201ENST00000426910 5675 ntBASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NPAS4Q8IUM7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 AC004898.1-201ENST00000451057 766 ntBASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 AC104982.3-201ENST00000581995 514 ntBASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.68■□□□□ 0.26
NPAS4Q8IUM7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPAS4Q8IUM7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms