Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 RPS8P6-201ENST00000426177 609 ntBASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 AL138918.1-201ENST00000568306 659 ntBASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 AC024267.1-201ENST00000582320 895 ntBASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 AL049840.3-201ENST00000602669 611 ntBASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 FOXO1B-201ENST00000504678 1527 ntBASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 AC007686.3-201ENST00000619017 3487 ntBASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 EMBP1-201ENST00000458200 901 ntBASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 AL450472.2-201ENST00000603663 1156 ntBASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 MIR7706-201ENST00000613747 67 ntBASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 SPTSSB-204ENST00000617024 1292 ntBASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LRRTM1Q86UE6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRRTM1Q86UE6 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.22
LRRTM1Q86UE6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.71□□□□□ -0.22
LRRTM1Q86UE6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.71□□□□□ -0.22
LRRTM1Q86UE6 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
LRRTM1Q86UE6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRRTM1Q86UE6 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
LRRTM1Q86UE6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRRTM1Q86UE6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LRRTM1Q86UE6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LRRTM1Q86UE6 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRRTM1Q86UE6 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms