Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD3Q7Z3D4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD3Q7Z3D4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.83■□□□□ 0.13
LYSMD3Q7Z3D4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
LYSMD3Q7Z3D4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
LYSMD3Q7Z3D4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LYSMD3Q7Z3D4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
LYSMD3Q7Z3D4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.83■□□□□ 0.13
LYSMD3Q7Z3D4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 AL035633.1-201ENST00000406139 838 ntBASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 AC114501.2-201ENST00000439631 535 ntBASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 TSPY16P-201ENST00000449843 468 ntBASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 SPDYE18-201ENST00000510091 1050 ntBASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 AC135586.1-201ENST00000539323 574 ntBASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 AC004461.2-201ENST00000629517 803 ntBASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.83■□□□□ 0.12
LYSMD3Q7Z3D4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 KRT18P64-201ENST00000434946 1219 ntBASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 COX20P2-201ENST00000452636 358 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms