Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 MTHFR-217ENST00000641820 1569 ntBASIC17.65■□□□□ 0.42
CCDC62Q6P9F0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CCDC62Q6P9F0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC62Q6P9F0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC62Q6P9F0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC62Q6P9F0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC62Q6P9F0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC62Q6P9F0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.64■□□□□ 0.42
CCDC62Q6P9F0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.64■□□□□ 0.42
CCDC62Q6P9F0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC62Q6P9F0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 BAATP1-201ENST00000412284 1225 ntBASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 AP001063.1-201ENST00000568332 529 ntBASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 AC009486.1-201ENST00000569860 813 ntBASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 PCDHB19P-201ENST00000570871 2371 ntBASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CCDC62Q6P9F0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 AL133267.1-201ENST00000398220 340 ntBASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 AC012441.1-201ENST00000446669 685 ntBASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 KLF2P4-201ENST00000451959 1225 ntBASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 AC015910.1-201ENST00000579400 975 ntBASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC62Q6P9F0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC62Q6P9F0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC62Q6P9F0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC62Q6P9F0 REXO1L6P-201ENST00000603433 1515 ntBASIC17.62■□□□□ 0.41
CCDC62Q6P9F0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC62Q6P9F0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC62Q6P9F0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms