Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 AL671277.2-201ENST00000458060 996 ntBASIC14.9□□□□□ -0.02
LPCAT4Q643R3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.9□□□□□ -0.02
LPCAT4Q643R3 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LPCAT4Q643R3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 ACE3P-201ENST00000423435 1973 ntBASIC14.89□□□□□ -0.03
LPCAT4Q643R3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 NSUN5P1-202ENST00000421140 1535 ntBASIC14.89□□□□□ -0.03
LPCAT4Q643R3 NSUN5P2-203ENST00000457352 1529 ntBASIC14.89□□□□□ -0.03
LPCAT4Q643R3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 AC114341.1-201ENST00000618070 349 ntBASIC14.89□□□□□ -0.03
LPCAT4Q643R3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LPCAT4Q643R3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LPCAT4Q643R3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms