Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 RNU1-129P-201ENST00000384064 167 ntBASIC15.26■□□□□ 0.03
RNF220Q5VTB9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 RNA5SP419-201ENST00000515908 135 ntBASIC15.26■□□□□ 0.03
RNF220Q5VTB9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 U1.21-201ENST00000580816 167 ntBASIC15.26■□□□□ 0.03
RNF220Q5VTB9 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 AL645728.2-201ENST00000641974 660 ntBASIC15.26■□□□□ 0.03
RNF220Q5VTB9 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF220Q5VTB9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 AC005562.1-201ENST00000583030 3219 ntBASIC15.25■□□□□ 0.03
RNF220Q5VTB9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 AC009947.1-201ENST00000444350 727 ntBASIC15.25■□□□□ 0.03
RNF220Q5VTB9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 AL662844.1-201ENST00000546340 181 ntBASIC15.25■□□□□ 0.03
RNF220Q5VTB9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 AP001005.1-201ENST00000571755 1248 ntBASIC15.25■□□□□ 0.03
RNF220Q5VTB9 AC021097.1-201ENST00000607902 574 ntBASIC15.25■□□□□ 0.03
RNF220Q5VTB9 AC116407.3-201ENST00000623905 1129 ntBASIC15.25■□□□□ 0.03
RNF220Q5VTB9 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 MBLAC2-202ENST00000514906 1936 ntBASIC15.25■□□□□ 0.03
RNF220Q5VTB9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF220Q5VTB9 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms