Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 PIN1P1-201ENST00000412108 996 ntBASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 KRT17P7-201ENST00000451704 1104 ntBASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 AC026150.2-201ENST00000564693 1156 ntBASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 AC020765.3-201ENST00000613051 740 ntBASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 MIR6080-201ENST00000617359 66 ntBASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 AP001350.2-201ENST00000625104 1094 ntBASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHRFAM7AQ494W8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 GPS2P2-201ENST00000430745 888 ntBASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 CYP2A7P1-201ENST00000595391 815 ntBASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 AC009118.2-201ENST00000613275 655 ntBASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 AC025048.6-201ENST00000634326 1161 ntBASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRFAM7AQ494W8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 AC067750.1-201ENST00000608826 6545 ntBASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 AC069224.1-201ENST00000566372 1715 ntBASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms