Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 TMBIM7P-203ENST00000641617 1718 ntBASIC14.85□□□□□ -0.03
TNFRSF17Q02223 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TNFRSF17Q02223 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 SSR4P1-203ENST00000599569 2260 ntBASIC14.84□□□□□ -0.03
TNFRSF17Q02223 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 KRT18P64-201ENST00000434946 1219 ntBASIC14.84□□□□□ -0.03
TNFRSF17Q02223 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 AC114501.2-201ENST00000439631 535 ntBASIC14.84□□□□□ -0.03
TNFRSF17Q02223 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 AC009407.1-201ENST00000568958 598 ntBASIC14.84□□□□□ -0.03
TNFRSF17Q02223 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFRSF17Q02223 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TNFRSF17Q02223 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TNFRSF17Q02223 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.83□□□□□ -0.03
TNFRSF17Q02223 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TNFRSF17Q02223 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
TNFRSF17Q02223 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
TNFRSF17Q02223 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 AC008738.7-201ENST00000609744 511 ntBASIC14.83□□□□□ -0.04
TNFRSF17Q02223 AC004461.2-201ENST00000629517 803 ntBASIC14.83□□□□□ -0.04
TNFRSF17Q02223 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 AF228730.6-201ENST00000641497 218 ntBASIC14.83□□□□□ -0.04
TNFRSF17Q02223 AC084121.3-201ENST00000641716 218 ntBASIC14.83□□□□□ -0.04
TNFRSF17Q02223 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 AC136621.1-201ENST00000624017 2304 ntBASIC14.83□□□□□ -0.04
TNFRSF17Q02223 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TNFRSF17Q02223 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms