Protein–RNA interactions for Protein: P84550

SKOR1, SKI family transcriptional corepressor 1, humanhuman

Predictions only

Length 965 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1P84550 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SKOR1P84550 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SKOR1P84550 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
SKOR1P84550 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SKOR1P84550 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SKOR1P84550 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SKOR1P84550 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SKOR1P84550 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SKOR1P84550 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SKOR1P84550 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SKOR1P84550 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SKOR1P84550 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.6■□□□□ 0.25
SKOR1P84550 AL035633.1-201ENST00000406139 838 ntBASIC16.6■□□□□ 0.25
SKOR1P84550 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.6■□□□□ 0.25
SKOR1P84550 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.6■□□□□ 0.25
SKOR1P84550 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.6■□□□□ 0.25
SKOR1P84550 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SKOR1P84550 SPDYE11-202ENST00000450699 704 ntBASIC16.6■□□□□ 0.25
SKOR1P84550 RN7SL589P-201ENST00000481268 310 ntBASIC16.6■□□□□ 0.25
SKOR1P84550 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SKOR1P84550 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.6■□□□□ 0.25
SKOR1P84550 SPCS2P1-201ENST00000561636 679 ntBASIC16.6■□□□□ 0.25
SKOR1P84550 SPDYE9P-201ENST00000570642 692 ntBASIC16.6■□□□□ 0.25
SKOR1P84550 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.6■□□□□ 0.25
SKOR1P84550 AC073389.1-201ENST00000595595 795 ntBASIC16.6■□□□□ 0.25
SKOR1P84550 SPDYE10P-202ENST00000612005 668 ntBASIC16.6■□□□□ 0.25
SKOR1P84550 SPDYE8P-202ENST00000612377 668 ntBASIC16.6■□□□□ 0.25
SKOR1P84550 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.6■□□□□ 0.25
SKOR1P84550 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SKOR1P84550 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SKOR1P84550 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.6■□□□□ 0.25
SKOR1P84550 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SKOR1P84550 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SKOR1P84550 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SKOR1P84550 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.6■□□□□ 0.25
SKOR1P84550 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.59■□□□□ 0.25
SKOR1P84550 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.59■□□□□ 0.25
SKOR1P84550 SPCS2P4-201ENST00000436160 681 ntBASIC16.59■□□□□ 0.25
SKOR1P84550 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
SKOR1P84550 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
SKOR1P84550 TIMM8BP1-201ENST00000452384 211 ntBASIC16.59■□□□□ 0.25
SKOR1P84550 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.59■□□□□ 0.25
SKOR1P84550 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SKOR1P84550 AC079140.1-201ENST00000508039 487 ntBASIC16.59■□□□□ 0.25
SKOR1P84550 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SKOR1P84550 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SKOR1P84550 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
SKOR1P84550 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.59■□□□□ 0.25
SKOR1P84550 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.59■□□□□ 0.25
SKOR1P84550 LINC01225-203ENST00000563550 1244 ntBASIC16.59■□□□□ 0.25
SKOR1P84550 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.59■□□□□ 0.25
SKOR1P84550 AC027307.2-201ENST00000591252 911 ntBASIC16.59■□□□□ 0.25
SKOR1P84550 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.59■□□□□ 0.25
SKOR1P84550 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SKOR1P84550 AC008267.7-201ENST00000624570 1194 ntBASIC16.59■□□□□ 0.25
SKOR1P84550 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.59■□□□□ 0.25
SKOR1P84550 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SKOR1P84550 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.59■□□□□ 0.25
SKOR1P84550 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SKOR1P84550 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SKOR1P84550 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SKOR1P84550 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.59■□□□□ 0.25
SKOR1P84550 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.59■□□□□ 0.25
SKOR1P84550 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
SKOR1P84550 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.59■□□□□ 0.25
SKOR1P84550 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.59■□□□□ 0.25
SKOR1P84550 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SKOR1P84550 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SKOR1P84550 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SKOR1P84550 U82695.1-201ENST00000635752 1889 ntBASIC16.59■□□□□ 0.25
SKOR1P84550 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SKOR1P84550 AC112693.3-201ENST00000624819 1983 ntBASIC16.58■□□□□ 0.25
SKOR1P84550 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
SKOR1P84550 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SKOR1P84550 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
SKOR1P84550 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SKOR1P84550 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SKOR1P84550 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.58■□□□□ 0.25
SKOR1P84550 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
SKOR1P84550 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SKOR1P84550 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms