Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
YBX1P67809 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
YBX1P67809 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
YBX1P67809 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
YBX1P67809 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
YBX1P67809 PHKG1P2-201ENST00000457537 863 ntBASIC15.35■□□□□ 0.05
YBX1P67809 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.35■□□□□ 0.05
YBX1P67809 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.35■□□□□ 0.05
YBX1P67809 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.35■□□□□ 0.05
YBX1P67809 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.35■□□□□ 0.05
YBX1P67809 AC044860.1-202ENST00000559481 777 ntBASIC15.35■□□□□ 0.05
YBX1P67809 MIR4313-201ENST00000580760 101 ntBASIC15.35■□□□□ 0.05
YBX1P67809 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.35■□□□□ 0.05
YBX1P67809 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.35■□□□□ 0.05
YBX1P67809 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
YBX1P67809 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
YBX1P67809 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
YBX1P67809 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
YBX1P67809 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.35■□□□□ 0.05
YBX1P67809 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
YBX1P67809 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.35■□□□□ 0.05
YBX1P67809 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.35■□□□□ 0.05
YBX1P67809 AC087499.5-201ENST00000452760 1342 ntBASIC15.35■□□□□ 0.05
YBX1P67809 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
YBX1P67809 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
YBX1P67809 TCAF2P1-201ENST00000291129 2421 ntBASIC15.35■□□□□ 0.05
YBX1P67809 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
YBX1P67809 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
YBX1P67809 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
YBX1P67809 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
YBX1P67809 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.35■□□□□ 0.05
YBX1P67809 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.35■□□□□ 0.05
YBX1P67809 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
YBX1P67809 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.34■□□□□ 0.05
YBX1P67809 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
YBX1P67809 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.34■□□□□ 0.05
YBX1P67809 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.34■□□□□ 0.05
YBX1P67809 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.34■□□□□ 0.05
YBX1P67809 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.34■□□□□ 0.05
YBX1P67809 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.34■□□□□ 0.05
YBX1P67809 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.34■□□□□ 0.05
YBX1P67809 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.34■□□□□ 0.05
YBX1P67809 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.34■□□□□ 0.05
YBX1P67809 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.34■□□□□ 0.05
YBX1P67809 AC009477.1-201ENST00000452936 217 ntBASIC15.34■□□□□ 0.05
YBX1P67809 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.34■□□□□ 0.05
YBX1P67809 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.34■□□□□ 0.05
YBX1P67809 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.34■□□□□ 0.05
YBX1P67809 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.34■□□□□ 0.05
YBX1P67809 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.34■□□□□ 0.05
YBX1P67809 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.34■□□□□ 0.05
YBX1P67809 HNRNPUP1-201ENST00000554987 333 ntBASIC15.34■□□□□ 0.05
YBX1P67809 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
YBX1P67809 AC097359.3-201ENST00000603982 1210 ntBASIC15.34■□□□□ 0.05
YBX1P67809 AC008738.7-201ENST00000609744 511 ntBASIC15.34■□□□□ 0.05
YBX1P67809 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
YBX1P67809 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.34■□□□□ 0.05
YBX1P67809 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
YBX1P67809 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.34■□□□□ 0.05
YBX1P67809 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
YBX1P67809 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.34■□□□□ 0.05
YBX1P67809 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.34■□□□□ 0.05
YBX1P67809 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
YBX1P67809 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
YBX1P67809 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.34■□□□□ 0.05
YBX1P67809 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.34■□□□□ 0.05
YBX1P67809 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
YBX1P67809 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.33■□□□□ 0.05
YBX1P67809 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
YBX1P67809 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
YBX1P67809 AC087481.3-201ENST00000602886 1894 ntBASIC15.33■□□□□ 0.05
YBX1P67809 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
YBX1P67809 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
YBX1P67809 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
YBX1P67809 AL009178.2-201ENST00000597278 2719 ntBASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms