Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.11□□□□□ -0.15
CLRN1P58418 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.11□□□□□ -0.15
CLRN1P58418 CETN4P-206ENST00000642099 2168 ntBASIC14.11□□□□□ -0.15
CLRN1P58418 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLRN1P58418 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLRN1P58418 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.11□□□□□ -0.15
CLRN1P58418 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.11□□□□□ -0.15
CLRN1P58418 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.11□□□□□ -0.15
CLRN1P58418 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLRN1P58418 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.11□□□□□ -0.15
CLRN1P58418 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLRN1P58418 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLRN1P58418 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLRN1P58418 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLRN1P58418 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CLRN1P58418 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLRN1P58418 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLRN1P58418 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLRN1P58418 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.11□□□□□ -0.15
CLRN1P58418 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLRN1P58418 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.1□□□□□ -0.15
CLRN1P58418 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CLRN1P58418 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.1□□□□□ -0.15
CLRN1P58418 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.1□□□□□ -0.15
CLRN1P58418 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.1□□□□□ -0.15
CLRN1P58418 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.1□□□□□ -0.15
CLRN1P58418 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLRN1P58418 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.1□□□□□ -0.15
CLRN1P58418 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
CLRN1P58418 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLRN1P58418 FO393414.2-201ENST00000405153 598 ntBASIC14.1□□□□□ -0.15
CLRN1P58418 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 CNN2P2-201ENST00000443536 909 ntBASIC14.1□□□□□ -0.15
CLRN1P58418 CNN2P3-201ENST00000450201 906 ntBASIC14.1□□□□□ -0.15
CLRN1P58418 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CLRN1P58418 AC025678.2-201ENST00000562061 970 ntBASIC14.1□□□□□ -0.15
CLRN1P58418 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.1□□□□□ -0.15
CLRN1P58418 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.1□□□□□ -0.15
CLRN1P58418 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.1□□□□□ -0.15
CLRN1P58418 AL133215.2-201ENST00000609242 977 ntBASIC14.1□□□□□ -0.15
CLRN1P58418 AL136317.3-201ENST00000618497 906 ntBASIC14.1□□□□□ -0.15
CLRN1P58418 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CLRN1P58418 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLRN1P58418 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.1□□□□□ -0.15
CLRN1P58418 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CLRN1P58418 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLRN1P58418 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CLRN1P58418 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLRN1P58418 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CLRN1P58418 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.1□□□□□ -0.15
CLRN1P58418 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.09□□□□□ -0.15
CLRN1P58418 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.09□□□□□ -0.15
CLRN1P58418 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.09□□□□□ -0.15
CLRN1P58418 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.09□□□□□ -0.15
CLRN1P58418 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.09□□□□□ -0.15
CLRN1P58418 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 AC073347.1-201ENST00000421633 2643 ntBASIC14.09□□□□□ -0.15
CLRN1P58418 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CLRN1P58418 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CLRN1P58418 SPDYE17-201ENST00000412399 783 ntBASIC14.09□□□□□ -0.15
CLRN1P58418 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.09□□□□□ -0.15
CLRN1P58418 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 HLA-J-203ENST00000494367 1087 ntBASIC14.09□□□□□ -0.15
CLRN1P58418 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.09□□□□□ -0.15
CLRN1P58418 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 AC109322.1-201ENST00000524499 1264 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms