Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.11■□□□□ 0.01
VSX2P58304 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.11■□□□□ 0.01
VSX2P58304 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.11■□□□□ 0.01
VSX2P58304 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
VSX2P58304 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.1■□□□□ 0.01
VSX2P58304 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.1■□□□□ 0.01
VSX2P58304 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
VSX2P58304 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
VSX2P58304 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
VSX2P58304 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.1■□□□□ 0.01
VSX2P58304 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
VSX2P58304 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.1■□□□□ 0.01
VSX2P58304 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
VSX2P58304 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.1■□□□□ 0.01
VSX2P58304 AC190387.1-201ENST00000551683 408 ntBASIC15.1■□□□□ 0.01
VSX2P58304 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
VSX2P58304 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.1■□□□□ 0.01
VSX2P58304 AC092337.1-201ENST00000568699 1129 ntBASIC15.1■□□□□ 0.01
VSX2P58304 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.1■□□□□ 0.01
VSX2P58304 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.1■□□□□ 0.01
VSX2P58304 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.1■□□□□ 0.01
VSX2P58304 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.1■□□□□ 0.01
VSX2P58304 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.1■□□□□ 0.01
VSX2P58304 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
VSX2P58304 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VSX2P58304 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.1■□□□□ 0.01
VSX2P58304 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VSX2P58304 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
VSX2P58304 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
VSX2P58304 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
VSX2P58304 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
VSX2P58304 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VSX2P58304 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
VSX2P58304 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.1■□□□□ 0.01
VSX2P58304 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VSX2P58304 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VSX2P58304 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VSX2P58304 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VSX2P58304 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VSX2P58304 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VSX2P58304 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VSX2P58304 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VSX2P58304 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
VSX2P58304 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VSX2P58304 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.09■□□□□ 0.01
VSX2P58304 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
VSX2P58304 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.09■□□□□ 0.01
VSX2P58304 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VSX2P58304 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VSX2P58304 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
VSX2P58304 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VSX2P58304 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VSX2P58304 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VSX2P58304 RPL13P2-201ENST00000440687 659 ntBASIC15.09■□□□□ 0.01
VSX2P58304 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.09■□□□□ 0.01
VSX2P58304 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.09■□□□□ 0.01
VSX2P58304 MEIS3P1-201ENST00000495167 958 ntBASIC15.09■□□□□ 0.01
VSX2P58304 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.09■□□□□ 0.01
VSX2P58304 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.09■□□□□ 0.01
VSX2P58304 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
VSX2P58304 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.09■□□□□ 0.01
VSX2P58304 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
VSX2P58304 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.09■□□□□ 0.01
VSX2P58304 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VSX2P58304 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.09■□□□□ 0.01
VSX2P58304 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
VSX2P58304 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
VSX2P58304 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VSX2P58304 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
VSX2P58304 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
VSX2P58304 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VSX2P58304 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VSX2P58304 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms