Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CDH13P55290 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.45■□□□□ 0.06
CDH13P55290 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.45■□□□□ 0.06
CDH13P55290 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH13P55290 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.45■□□□□ 0.06
CDH13P55290 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CDH13P55290 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 ALG1L5P-201ENST00000482043 771 ntBASIC15.45■□□□□ 0.06
CDH13P55290 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.45■□□□□ 0.06
CDH13P55290 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.45■□□□□ 0.06
CDH13P55290 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.45■□□□□ 0.06
CDH13P55290 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.45■□□□□ 0.06
CDH13P55290 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH13P55290 KRT18P58-201ENST00000527480 1120 ntBASIC15.45■□□□□ 0.06
CDH13P55290 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH13P55290 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CDH13P55290 AC106881.1-201ENST00000605849 3329 ntBASIC15.45■□□□□ 0.06
CDH13P55290 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CDH13P55290 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CDH13P55290 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CDH13P55290 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CDH13P55290 AL136379.1-201ENST00000623471 2642 ntBASIC15.45■□□□□ 0.06
CDH13P55290 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH13P55290 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH13P55290 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH13P55290 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CDH13P55290 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH13P55290 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CDH13P55290 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH13P55290 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH13P55290 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH13P55290 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
CDH13P55290 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH13P55290 AC004832.2-201ENST00000426397 482 ntBASIC15.44■□□□□ 0.06
CDH13P55290 HTR5BP-201ENST00000430851 1154 ntBASIC15.44■□□□□ 0.06
CDH13P55290 ACTG1P14-201ENST00000446382 1122 ntBASIC15.44■□□□□ 0.06
CDH13P55290 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH13P55290 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.44■□□□□ 0.06
CDH13P55290 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH13P55290 RARRES2P9-201ENST00000565168 469 ntBASIC15.44■□□□□ 0.06
CDH13P55290 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.44■□□□□ 0.06
CDH13P55290 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH13P55290 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.44■□□□□ 0.06
CDH13P55290 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH13P55290 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH13P55290 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH13P55290 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH13P55290 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
CDH13P55290 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CDH13P55290 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH13P55290 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH13P55290 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH13P55290 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH13P55290 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CDH13P55290 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH13P55290 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH13P55290 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
CDH13P55290 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH13P55290 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.43■□□□□ 0.06
CDH13P55290 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH13P55290 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH13P55290 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CDH13P55290 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CDH13P55290 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
CDH13P55290 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CDH13P55290 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
CDH13P55290 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH13P55290 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH13P55290 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.43■□□□□ 0.06
CDH13P55290 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.43■□□□□ 0.06
CDH13P55290 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH13P55290 AC084121.4-201ENST00000641598 221 ntBASIC15.43■□□□□ 0.06
CDH13P55290 AF228730.8-201ENST00000642140 221 ntBASIC15.43■□□□□ 0.06
CDH13P55290 KRT8P44-201ENST00000441609 1350 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms