Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NCKAP1LP55160 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCKAP1LP55160 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCKAP1LP55160 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NCKAP1LP55160 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.16■□□□□ 0.34
NCKAP1LP55160 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.16■□□□□ 0.34
NCKAP1LP55160 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCKAP1LP55160 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.16■□□□□ 0.34
NCKAP1LP55160 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NCKAP1LP55160 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCKAP1LP55160 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.16■□□□□ 0.34
NCKAP1LP55160 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
NCKAP1LP55160 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCKAP1LP55160 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCKAP1LP55160 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
NCKAP1LP55160 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.15■□□□□ 0.34
NCKAP1LP55160 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.15■□□□□ 0.34
NCKAP1LP55160 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.15■□□□□ 0.34
NCKAP1LP55160 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.15■□□□□ 0.34
NCKAP1LP55160 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.15■□□□□ 0.34
NCKAP1LP55160 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.15■□□□□ 0.34
NCKAP1LP55160 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.15■□□□□ 0.34
NCKAP1LP55160 AC123567.1-201ENST00000548294 1261 ntBASIC17.15■□□□□ 0.34
NCKAP1LP55160 TP53TG3HP-202ENST00000569755 579 ntBASIC17.15■□□□□ 0.34
NCKAP1LP55160 AL662799.1-202ENST00000614205 422 ntBASIC17.15■□□□□ 0.34
NCKAP1LP55160 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
NCKAP1LP55160 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NCKAP1LP55160 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 AL596257.1-201ENST00000641463 2694 ntBASIC17.15■□□□□ 0.34
NCKAP1LP55160 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.15■□□□□ 0.34
NCKAP1LP55160 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NCKAP1LP55160 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.15■□□□□ 0.34
NCKAP1LP55160 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
NCKAP1LP55160 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.15■□□□□ 0.34
NCKAP1LP55160 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NCKAP1LP55160 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.14■□□□□ 0.34
NCKAP1LP55160 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.14■□□□□ 0.34
NCKAP1LP55160 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
NCKAP1LP55160 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1LP55160 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.14■□□□□ 0.33
NCKAP1LP55160 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NCKAP1LP55160 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.14■□□□□ 0.33
NCKAP1LP55160 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1LP55160 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1LP55160 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1LP55160 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NCKAP1LP55160 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1LP55160 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1LP55160 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1LP55160 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1LP55160 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.14■□□□□ 0.33
NCKAP1LP55160 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1LP55160 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NCKAP1LP55160 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.14■□□□□ 0.33
NCKAP1LP55160 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1LP55160 RPL5P21-201ENST00000404620 815 ntBASIC17.14■□□□□ 0.33
NCKAP1LP55160 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.14■□□□□ 0.33
NCKAP1LP55160 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.14■□□□□ 0.33
NCKAP1LP55160 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.14■□□□□ 0.33
NCKAP1LP55160 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NCKAP1LP55160 BRI3BPP1-201ENST00000594224 787 ntBASIC17.14■□□□□ 0.33
NCKAP1LP55160 AC025181.2-201ENST00000606994 802 ntBASIC17.14■□□□□ 0.33
NCKAP1LP55160 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1LP55160 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1LP55160 AC007431.3-201ENST00000623221 587 ntBASIC17.14■□□□□ 0.33
NCKAP1LP55160 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1LP55160 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NCKAP1LP55160 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NCKAP1LP55160 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1LP55160 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1LP55160 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1LP55160 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1LP55160 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.14■□□□□ 0.33
NCKAP1LP55160 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1LP55160 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
NCKAP1LP55160 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1LP55160 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NCKAP1LP55160 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms