Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC4P55056 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
APOC4P55056 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC4P55056 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC4P55056 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC4P55056 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC11.53□□□□□ -0.56
APOC4P55056 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
APOC4P55056 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC4P55056 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.53□□□□□ -0.56
APOC4P55056 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC11.53□□□□□ -0.56
APOC4P55056 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC4P55056 AC244107.1-201ENST00000442033 332 ntBASIC11.53□□□□□ -0.56
APOC4P55056 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC11.53□□□□□ -0.56
APOC4P55056 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC4P55056 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC11.53□□□□□ -0.56
APOC4P55056 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC4P55056 MIR8072-201ENST00000614241 80 ntBASIC11.53□□□□□ -0.56
APOC4P55056 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC4P55056 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC4P55056 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
APOC4P55056 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.53□□□□□ -0.56
APOC4P55056 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC11.53□□□□□ -0.56
APOC4P55056 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
APOC4P55056 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC11.53□□□□□ -0.56
APOC4P55056 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC11.53□□□□□ -0.56
APOC4P55056 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.53□□□□□ -0.56
APOC4P55056 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC4P55056 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.56
APOC4P55056 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC11.52□□□□□ -0.56
APOC4P55056 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
APOC4P55056 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC11.52□□□□□ -0.56
APOC4P55056 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOC4P55056 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOC4P55056 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOC4P55056 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
APOC4P55056 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOC4P55056 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOC4P55056 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
APOC4P55056 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOC4P55056 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
APOC4P55056 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOC4P55056 AC092364.2-201ENST00000596710 2692 ntBASIC11.52□□□□□ -0.57
APOC4P55056 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC4P55056 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
APOC4P55056 GSAP-205ENST00000430584 600 ntTSL 5 BASIC11.52□□□□□ -0.57
APOC4P55056 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOC4P55056 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC11.52□□□□□ -0.57
APOC4P55056 INE1-201ENST00000456273 945 ntBASIC11.52□□□□□ -0.57
APOC4P55056 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC11.52□□□□□ -0.57
APOC4P55056 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC11.52□□□□□ -0.57
APOC4P55056 ELK1P1-201ENST00000485699 580 ntBASIC11.52□□□□□ -0.57
APOC4P55056 GIMAP3P-201ENST00000495150 836 ntBASIC11.52□□□□□ -0.57
APOC4P55056 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC11.52□□□□□ -0.57
APOC4P55056 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC11.52□□□□□ -0.57
APOC4P55056 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
APOC4P55056 AC092552.1-201ENST00000547243 906 ntBASIC11.52□□□□□ -0.57
APOC4P55056 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC11.52□□□□□ -0.57
APOC4P55056 WASH4P-201ENST00000564273 1246 ntBASIC11.52□□□□□ -0.57
APOC4P55056 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC11.52□□□□□ -0.57
APOC4P55056 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC11.52□□□□□ -0.57
APOC4P55056 SRP9-204ENST00000619790 377 ntTSL 2 BASIC11.52□□□□□ -0.57
APOC4P55056 AL033527.5-201ENST00000641382 801 ntBASIC11.52□□□□□ -0.57
APOC4P55056 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms