Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PSMD4P55036 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PSMD4P55036 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.72□□□□□ -0.05
PSMD4P55036 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PSMD4P55036 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PSMD4P55036 LINC00554-201ENST00000564841 3011 ntBASIC14.72□□□□□ -0.05
PSMD4P55036 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PSMD4P55036 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.72□□□□□ -0.05
PSMD4P55036 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PSMD4P55036 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PSMD4P55036 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PSMD4P55036 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PSMD4P55036 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PSMD4P55036 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PSMD4P55036 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.72□□□□□ -0.05
PSMD4P55036 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.72□□□□□ -0.05
PSMD4P55036 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PSMD4P55036 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PSMD4P55036 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.72□□□□□ -0.05
PSMD4P55036 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.72□□□□□ -0.05
PSMD4P55036 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.72□□□□□ -0.05
PSMD4P55036 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PSMD4P55036 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.72□□□□□ -0.05
PSMD4P55036 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.72□□□□□ -0.05
PSMD4P55036 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PSMD4P55036 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.72□□□□□ -0.05
PSMD4P55036 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PSMD4P55036 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PSMD4P55036 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PSMD4P55036 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.72□□□□□ -0.05
PSMD4P55036 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PSMD4P55036 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PSMD4P55036 AC132872.4-202ENST00000622924 2756 ntBASIC14.72□□□□□ -0.05
PSMD4P55036 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PSMD4P55036 FO538757.1-201ENST00000623083 1397 ntBASIC14.72□□□□□ -0.05
PSMD4P55036 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PSMD4P55036 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.71□□□□□ -0.05
PSMD4P55036 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.71□□□□□ -0.05
PSMD4P55036 MYO15B-237ENST00000642007 4893 ntBASIC14.71□□□□□ -0.05
PSMD4P55036 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
PSMD4P55036 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.71□□□□□ -0.05
PSMD4P55036 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PSMD4P55036 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.71□□□□□ -0.05
PSMD4P55036 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.71□□□□□ -0.05
PSMD4P55036 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.71□□□□□ -0.05
PSMD4P55036 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.71□□□□□ -0.05
PSMD4P55036 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.71□□□□□ -0.05
PSMD4P55036 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.71□□□□□ -0.05
PSMD4P55036 AC051619.7-201ENST00000568314 623 ntBASIC14.71□□□□□ -0.05
PSMD4P55036 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.71□□□□□ -0.05
PSMD4P55036 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.71□□□□□ -0.05
PSMD4P55036 AC093028.1-201ENST00000622998 982 ntBASIC14.71□□□□□ -0.05
PSMD4P55036 AC073592.8-201ENST00000624126 511 ntBASIC14.71□□□□□ -0.05
PSMD4P55036 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PSMD4P55036 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.71□□□□□ -0.05
PSMD4P55036 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
PSMD4P55036 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PSMD4P55036 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
PSMD4P55036 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.71□□□□□ -0.06
PSMD4P55036 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
PSMD4P55036 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.71□□□□□ -0.06
PSMD4P55036 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.71□□□□□ -0.06
PSMD4P55036 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
PSMD4P55036 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PSMD4P55036 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
PSMD4P55036 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
PSMD4P55036 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PSMD4P55036 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PSMD4P55036 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
PSMD4P55036 PRAL-201ENST00000624952 3286 ntBASIC14.7□□□□□ -0.06
PSMD4P55036 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.7□□□□□ -0.06
PSMD4P55036 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PSMD4P55036 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.7□□□□□ -0.06
PSMD4P55036 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PSMD4P55036 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PSMD4P55036 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PSMD4P55036 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PSMD4P55036 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PSMD4P55036 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PSMD4P55036 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PSMD4P55036 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms