Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.14■□□□□ 0.01
EPHA4P54764 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
EPHA4P54764 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.14■□□□□ 0.01
EPHA4P54764 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA4P54764 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
EPHA4P54764 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 LINC02199-201ENST00000506655 2702 ntBASIC15.13■□□□□ 0.01
EPHA4P54764 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
EPHA4P54764 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.13■□□□□ 0.01
EPHA4P54764 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
EPHA4P54764 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.13■□□□□ 0.01
EPHA4P54764 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.13■□□□□ 0.01
EPHA4P54764 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.13■□□□□ 0.01
EPHA4P54764 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.13■□□□□ 0.01
EPHA4P54764 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.13■□□□□ 0.01
EPHA4P54764 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
EPHA4P54764 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.13■□□□□ 0.01
EPHA4P54764 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.13■□□□□ 0.01
EPHA4P54764 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.13■□□□□ 0.01
EPHA4P54764 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.13■□□□□ 0.01
EPHA4P54764 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
EPHA4P54764 MIR5189-201ENST00000577370 114 ntBASIC15.13■□□□□ 0.01
EPHA4P54764 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.13■□□□□ 0.01
EPHA4P54764 AC015910.1-201ENST00000579400 975 ntBASIC15.13■□□□□ 0.01
EPHA4P54764 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 BTNL10-201ENST00000595971 695 ntBASIC15.13■□□□□ 0.01
EPHA4P54764 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.13■□□□□ 0.01
EPHA4P54764 AC233724.13-201ENST00000598383 410 ntBASIC15.13■□□□□ 0.01
EPHA4P54764 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.13■□□□□ 0.01
EPHA4P54764 RPSAP52-203ENST00000622976 1023 ntBASIC15.13■□□□□ 0.01
EPHA4P54764 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.13■□□□□ 0.01
EPHA4P54764 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
EPHA4P54764 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA4P54764 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.12■□□□□ 0.01
EPHA4P54764 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.12■□□□□ 0.01
EPHA4P54764 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.12■□□□□ 0.01
EPHA4P54764 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
EPHA4P54764 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
EPHA4P54764 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.12■□□□□ 0.01
EPHA4P54764 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
EPHA4P54764 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.12■□□□□ 0.01
EPHA4P54764 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
EPHA4P54764 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
EPHA4P54764 SSR1P1-201ENST00000407630 814 ntBASIC15.12■□□□□ 0.01
EPHA4P54764 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA4P54764 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.12■□□□□ 0.01
EPHA4P54764 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
EPHA4P54764 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.12■□□□□ 0.01
EPHA4P54764 VDAC1P7-201ENST00000462417 847 ntBASIC15.12■□□□□ 0.01
EPHA4P54764 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.12■□□□□ 0.01
EPHA4P54764 USP32P1-208ENST00000506594 1164 ntBASIC15.12■□□□□ 0.01
EPHA4P54764 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.12■□□□□ 0.01
EPHA4P54764 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.12■□□□□ 0.01
EPHA4P54764 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.12■□□□□ 0.01
EPHA4P54764 AC009486.1-201ENST00000569860 813 ntBASIC15.12■□□□□ 0.01
EPHA4P54764 MIR4313-201ENST00000580760 101 ntBASIC15.12■□□□□ 0.01
EPHA4P54764 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.12■□□□□ 0.01
EPHA4P54764 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms