Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK7P50613 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK7P50613 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK7P50613 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CDK7P50613 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDK7P50613 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.32■□□□□ 0.36
CDK7P50613 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.32■□□□□ 0.36
CDK7P50613 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.32■□□□□ 0.36
CDK7P50613 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDK7P50613 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.32■□□□□ 0.36
CDK7P50613 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK7P50613 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDK7P50613 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDK7P50613 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK7P50613 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDK7P50613 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.31■□□□□ 0.36
CDK7P50613 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.31■□□□□ 0.36
CDK7P50613 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDK7P50613 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK7P50613 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDK7P50613 PCDHA14-201ENST00000506751 2298 ntBASIC17.31■□□□□ 0.36
CDK7P50613 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CDK7P50613 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDK7P50613 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK7P50613 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.31■□□□□ 0.36
CDK7P50613 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK7P50613 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK7P50613 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDK7P50613 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK7P50613 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDK7P50613 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK7P50613 AC004898.1-201ENST00000451057 766 ntBASIC17.31■□□□□ 0.36
CDK7P50613 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.31■□□□□ 0.36
CDK7P50613 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDK7P50613 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.31■□□□□ 0.36
CDK7P50613 AC005695.3-201ENST00000614522 232 ntBASIC17.31■□□□□ 0.36
CDK7P50613 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.31■□□□□ 0.36
CDK7P50613 DOC2GP-204ENST00000639052 2548 ntBASIC17.31■□□□□ 0.36
CDK7P50613 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK7P50613 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK7P50613 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK7P50613 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK7P50613 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK7P50613 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDK7P50613 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDK7P50613 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.31■□□□□ 0.36
CDK7P50613 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.31■□□□□ 0.36
CDK7P50613 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDK7P50613 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.31■□□□□ 0.36
CDK7P50613 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDK7P50613 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK7P50613 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK7P50613 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK7P50613 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.3■□□□□ 0.36
CDK7P50613 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK7P50613 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDK7P50613 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK7P50613 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.3■□□□□ 0.36
CDK7P50613 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK7P50613 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDK7P50613 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDK7P50613 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK7P50613 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.3■□□□□ 0.36
CDK7P50613 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CDK7P50613 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDK7P50613 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK7P50613 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.3■□□□□ 0.36
CDK7P50613 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CDK7P50613 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.3■□□□□ 0.36
CDK7P50613 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.3■□□□□ 0.36
CDK7P50613 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.3■□□□□ 0.36
CDK7P50613 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CDK7P50613 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.3■□□□□ 0.36
CDK7P50613 AC138951.2-201ENST00000623455 1161 ntBASIC17.3■□□□□ 0.36
CDK7P50613 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK7P50613 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDK7P50613 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK7P50613 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK7P50613 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK7P50613 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK7P50613 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.3■□□□□ 0.36
CDK7P50613 AC138028.6-201ENST00000616106 1482 ntBASIC17.3■□□□□ 0.36
CDK7P50613 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK7P50613 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDK7P50613 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK7P50613 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.3■□□□□ 0.36
CDK7P50613 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CDK7P50613 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CDK7P50613 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDK7P50613 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.29■□□□□ 0.36
CDK7P50613 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CDK7P50613 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.29■□□□□ 0.36
CDK7P50613 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDK7P50613 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDK7P50613 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.29■□□□□ 0.36
CDK7P50613 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDK7P50613 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDK7P50613 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDK7P50613 BX284668.4-201ENST00000453917 508 ntBASIC17.29■□□□□ 0.36
CDK7P50613 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms