Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.85□□□□□ -0.03
GABRA4P48169 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.84□□□□□ -0.03
GABRA4P48169 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.84□□□□□ -0.03
GABRA4P48169 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.84□□□□□ -0.03
GABRA4P48169 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
GABRA4P48169 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.84□□□□□ -0.03
GABRA4P48169 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
GABRA4P48169 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.84□□□□□ -0.03
GABRA4P48169 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.84□□□□□ -0.03
GABRA4P48169 OR8S1-201ENST00000310194 1080 ntBASIC14.84□□□□□ -0.03
GABRA4P48169 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.84□□□□□ -0.03
GABRA4P48169 SOCS2P1-201ENST00000417727 557 ntBASIC14.84□□□□□ -0.03
GABRA4P48169 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.84□□□□□ -0.03
GABRA4P48169 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.84□□□□□ -0.03
GABRA4P48169 ENPP7P5-201ENST00000541031 1031 ntBASIC14.84□□□□□ -0.03
GABRA4P48169 MIR5189-201ENST00000577370 114 ntBASIC14.84□□□□□ -0.03
GABRA4P48169 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.84□□□□□ -0.03
GABRA4P48169 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.84□□□□□ -0.03
GABRA4P48169 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.84□□□□□ -0.03
GABRA4P48169 AC005252.2-201ENST00000624630 1141 ntBASIC14.84□□□□□ -0.03
GABRA4P48169 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.84□□□□□ -0.03
GABRA4P48169 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
GABRA4P48169 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
GABRA4P48169 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.84□□□□□ -0.03
GABRA4P48169 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
GABRA4P48169 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
GABRA4P48169 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.84□□□□□ -0.03
GABRA4P48169 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GABRA4P48169 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.83□□□□□ -0.03
GABRA4P48169 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.83□□□□□ -0.03
GABRA4P48169 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
GABRA4P48169 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GABRA4P48169 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GABRA4P48169 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.83□□□□□ -0.03
GABRA4P48169 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
GABRA4P48169 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
GABRA4P48169 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GABRA4P48169 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.83□□□□□ -0.04
GABRA4P48169 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.83□□□□□ -0.04
GABRA4P48169 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.83□□□□□ -0.04
GABRA4P48169 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
GABRA4P48169 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GABRA4P48169 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
GABRA4P48169 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GABRA4P48169 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.83□□□□□ -0.04
GABRA4P48169 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
GABRA4P48169 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GABRA4P48169 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.83□□□□□ -0.04
GABRA4P48169 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.83□□□□□ -0.04
GABRA4P48169 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.83□□□□□ -0.04
GABRA4P48169 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.83□□□□□ -0.04
GABRA4P48169 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.83□□□□□ -0.04
GABRA4P48169 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.83□□□□□ -0.04
GABRA4P48169 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
GABRA4P48169 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.83□□□□□ -0.04
GABRA4P48169 AC015936.2-201ENST00000593177 259 ntBASIC14.83□□□□□ -0.04
GABRA4P48169 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GABRA4P48169 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
GABRA4P48169 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
GABRA4P48169 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GABRA4P48169 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.83□□□□□ -0.04
GABRA4P48169 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GABRA4P48169 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GABRA4P48169 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
GABRA4P48169 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GABRA4P48169 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
GABRA4P48169 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GABRA4P48169 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
GABRA4P48169 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.83□□□□□ -0.04
GABRA4P48169 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
GABRA4P48169 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GABRA4P48169 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.83□□□□□ -0.04
GABRA4P48169 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GABRA4P48169 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GABRA4P48169 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
GABRA4P48169 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms