Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KDM5CP41229 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
KDM5CP41229 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KDM5CP41229 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KDM5CP41229 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
KDM5CP41229 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC23.05■■□□□ 1.28
KDM5CP41229 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
KDM5CP41229 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC23.05■■□□□ 1.28
KDM5CP41229 AC125604.1-201ENST00000496255 707 ntBASIC23.05■■□□□ 1.28
KDM5CP41229 AL805961.1-203ENST00000641078 1258 ntBASIC23.05■■□□□ 1.28
KDM5CP41229 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
KDM5CP41229 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KDM5CP41229 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
KDM5CP41229 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KDM5CP41229 CLUHP2-201ENST00000426660 1303 ntBASIC23.04■■□□□ 1.28
KDM5CP41229 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
KDM5CP41229 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
KDM5CP41229 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KDM5CP41229 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
KDM5CP41229 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KDM5CP41229 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
KDM5CP41229 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KDM5CP41229 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
KDM5CP41229 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC23.04■■□□□ 1.28
KDM5CP41229 AC019193.1-201ENST00000506678 823 ntBASIC23.04■■□□□ 1.28
KDM5CP41229 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
KDM5CP41229 MIR4754-201ENST00000582477 89 ntBASIC23.04■■□□□ 1.28
KDM5CP41229 MIR4750-201ENST00000584564 56 ntBASIC23.04■■□□□ 1.28
KDM5CP41229 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC23.04■■□□□ 1.28
KDM5CP41229 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC23.04■■□□□ 1.28
KDM5CP41229 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
KDM5CP41229 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
KDM5CP41229 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
KDM5CP41229 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KDM5CP41229 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KDM5CP41229 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
KDM5CP41229 AC099398.1-201ENST00000567919 2776 ntBASIC23.03■■□□□ 1.28
KDM5CP41229 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KDM5CP41229 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KDM5CP41229 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC23.03■■□□□ 1.28
KDM5CP41229 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KDM5CP41229 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
KDM5CP41229 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KDM5CP41229 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KDM5CP41229 ISCA2P1-201ENST00000425548 448 ntBASIC23.03■■□□□ 1.28
KDM5CP41229 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC23.03■■□□□ 1.28
KDM5CP41229 LY6E-208ENST00000520531 490 ntTSL 2 BASIC23.03■■□□□ 1.28
KDM5CP41229 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KDM5CP41229 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
KDM5CP41229 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KDM5CP41229 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
KDM5CP41229 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
KDM5CP41229 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
KDM5CP41229 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KDM5CP41229 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
KDM5CP41229 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
KDM5CP41229 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KDM5CP41229 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
KDM5CP41229 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC23.02■■□□□ 1.28
KDM5CP41229 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
KDM5CP41229 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
KDM5CP41229 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
KDM5CP41229 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC23.02■■□□□ 1.28
KDM5CP41229 RNMTL1P1-201ENST00000454103 560 ntBASIC23.02■■□□□ 1.28
KDM5CP41229 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
KDM5CP41229 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
KDM5CP41229 AC011491.1-203ENST00000637688 543 ntBASIC23.02■■□□□ 1.28
KDM5CP41229 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC23.02■■□□□ 1.27
KDM5CP41229 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KDM5CP41229 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KDM5CP41229 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KDM5CP41229 RN7SKP175-201ENST00000408472 289 ntBASIC23.01■■□□□ 1.27
KDM5CP41229 Z97180.1-201ENST00000445173 988 ntBASIC23.01■■□□□ 1.27
KDM5CP41229 AC004066.1-201ENST00000502488 802 ntBASIC23.01■■□□□ 1.27
KDM5CP41229 EID1-202ENST00000560490 584 ntTSL 3 BASIC23.01■■□□□ 1.27
KDM5CP41229 CENPX-208ENST00000584347 799 ntTSL 2 BASIC23.01■■□□□ 1.27
KDM5CP41229 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KDM5CP41229 AL162426.1-201ENST00000624141 743 ntBASIC23.01■■□□□ 1.27
KDM5CP41229 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC23.01■■□□□ 1.27
KDM5CP41229 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
KDM5CP41229 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
KDM5CP41229 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC23.01■■□□□ 1.27
KDM5CP41229 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC23.01■■□□□ 1.27
KDM5CP41229 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
KDM5CP41229 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC23.01■■□□□ 1.27
KDM5CP41229 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KDM5CP41229 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC23.01■■□□□ 1.27
KDM5CP41229 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KDM5CP41229 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
KDM5CP41229 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KDM5CP41229 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KDM5CP41229 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KDM5CP41229 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KDM5CP41229 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC23.01■■□□□ 1.27
KDM5CP41229 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KDM5CP41229 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC23.01■■□□□ 1.27
KDM5CP41229 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
KDM5CP41229 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC23.01■■□□□ 1.27
KDM5CP41229 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC23.01■■□□□ 1.27
KDM5CP41229 AC242376.1-201ENST00000559033 726 ntBASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms