Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
THBS4P35443 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
THBS4P35443 AL139010.1-201ENST00000454878 894 ntBASIC13.9□□□□□ -0.18
THBS4P35443 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.9□□□□□ -0.18
THBS4P35443 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.9□□□□□ -0.18
THBS4P35443 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.9□□□□□ -0.18
THBS4P35443 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
THBS4P35443 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
THBS4P35443 PPT1-215ENST00000641471 2368 ntBASIC13.9□□□□□ -0.18
THBS4P35443 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.9□□□□□ -0.18
THBS4P35443 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
THBS4P35443 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
THBS4P35443 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
THBS4P35443 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
THBS4P35443 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.9□□□□□ -0.18
THBS4P35443 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
THBS4P35443 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
THBS4P35443 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
THBS4P35443 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
THBS4P35443 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
THBS4P35443 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.9□□□□□ -0.18
THBS4P35443 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.9□□□□□ -0.18
THBS4P35443 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
THBS4P35443 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
THBS4P35443 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
THBS4P35443 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
THBS4P35443 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
THBS4P35443 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
THBS4P35443 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
THBS4P35443 SSR4P1-203ENST00000599569 2260 ntBASIC13.89□□□□□ -0.19
THBS4P35443 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
THBS4P35443 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.89□□□□□ -0.19
THBS4P35443 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
THBS4P35443 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.89□□□□□ -0.19
THBS4P35443 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
THBS4P35443 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
THBS4P35443 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
THBS4P35443 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
THBS4P35443 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
THBS4P35443 AP003680.1-201ENST00000598970 3660 ntBASIC13.89□□□□□ -0.19
THBS4P35443 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
THBS4P35443 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
THBS4P35443 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
THBS4P35443 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
THBS4P35443 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
THBS4P35443 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
THBS4P35443 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
THBS4P35443 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
THBS4P35443 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.89□□□□□ -0.19
THBS4P35443 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.89□□□□□ -0.19
THBS4P35443 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.89□□□□□ -0.19
THBS4P35443 TEX28P1-201ENST00000613479 1221 ntBASIC13.89□□□□□ -0.19
THBS4P35443 TEX28P2-201ENST00000617764 1221 ntBASIC13.89□□□□□ -0.19
THBS4P35443 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
THBS4P35443 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
THBS4P35443 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
THBS4P35443 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.89□□□□□ -0.19
THBS4P35443 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
THBS4P35443 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
THBS4P35443 AC134407.2-201ENST00000625089 1978 ntBASIC13.89□□□□□ -0.19
THBS4P35443 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.89□□□□□ -0.19
THBS4P35443 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
THBS4P35443 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
THBS4P35443 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS4P35443 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS4P35443 AC013268.4-201ENST00000637413 2228 ntBASIC13.88□□□□□ -0.19
THBS4P35443 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
THBS4P35443 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS4P35443 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS4P35443 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
THBS4P35443 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
THBS4P35443 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS4P35443 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.88□□□□□ -0.19
THBS4P35443 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
THBS4P35443 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
THBS4P35443 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS4P35443 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
THBS4P35443 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS4P35443 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
THBS4P35443 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS4P35443 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
THBS4P35443 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS4P35443 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
THBS4P35443 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
THBS4P35443 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS4P35443 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.88□□□□□ -0.19
THBS4P35443 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.88□□□□□ -0.19
THBS4P35443 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
THBS4P35443 TSSK5P-201ENST00000423978 907 ntBASIC13.88□□□□□ -0.19
THBS4P35443 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.88□□□□□ -0.19
THBS4P35443 UGT1A2P-201ENST00000454886 866 ntBASIC13.88□□□□□ -0.19
THBS4P35443 AC004890.2-204ENST00000481968 304 ntBASIC13.88□□□□□ -0.19
THBS4P35443 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.88□□□□□ -0.19
THBS4P35443 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.88□□□□□ -0.19
THBS4P35443 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.88□□□□□ -0.19
THBS4P35443 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS4P35443 AC243562.2-201ENST00000561247 970 ntBASIC13.88□□□□□ -0.19
THBS4P35443 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.88□□□□□ -0.19
THBS4P35443 MIR4745-201ENST00000577608 62 ntBASIC13.88□□□□□ -0.19
THBS4P35443 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms