Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 CNN2P2-201ENST00000443536 909 ntBASIC16.63■□□□□ 0.25
RFC1P35251 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
RFC1P35251 CNN2P3-201ENST00000450201 906 ntBASIC16.63■□□□□ 0.25
RFC1P35251 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.63■□□□□ 0.25
RFC1P35251 AC006538.3-201ENST00000612495 578 ntBASIC16.63■□□□□ 0.25
RFC1P35251 AL136317.3-201ENST00000618497 906 ntBASIC16.63■□□□□ 0.25
RFC1P35251 AC144831.1-201ENST00000573312 2656 ntBASIC16.63■□□□□ 0.25
RFC1P35251 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RFC1P35251 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.63■□□□□ 0.25
RFC1P35251 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.63■□□□□ 0.25
RFC1P35251 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.63■□□□□ 0.25
RFC1P35251 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RFC1P35251 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.63■□□□□ 0.25
RFC1P35251 AC127383.1-201ENST00000444697 1800 ntBASIC16.63■□□□□ 0.25
RFC1P35251 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFC1P35251 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.62■□□□□ 0.25
RFC1P35251 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFC1P35251 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RFC1P35251 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.62■□□□□ 0.25
RFC1P35251 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFC1P35251 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RFC1P35251 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFC1P35251 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.62■□□□□ 0.25
RFC1P35251 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFC1P35251 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFC1P35251 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFC1P35251 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFC1P35251 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.62■□□□□ 0.25
RFC1P35251 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.62■□□□□ 0.25
RFC1P35251 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.62■□□□□ 0.25
RFC1P35251 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFC1P35251 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.62■□□□□ 0.25
RFC1P35251 AC051619.7-201ENST00000568314 623 ntBASIC16.62■□□□□ 0.25
RFC1P35251 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.62■□□□□ 0.25
RFC1P35251 AC015911.4-201ENST00000588022 1070 ntBASIC16.62■□□□□ 0.25
RFC1P35251 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RFC1P35251 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.62■□□□□ 0.25
RFC1P35251 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFC1P35251 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.62■□□□□ 0.25
RFC1P35251 AC087481.3-201ENST00000602886 1894 ntBASIC16.62■□□□□ 0.25
RFC1P35251 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.62■□□□□ 0.25
RFC1P35251 KRT18P28-201ENST00000453838 1332 ntBASIC16.62■□□□□ 0.25
RFC1P35251 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RFC1P35251 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.62■□□□□ 0.25
RFC1P35251 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.62■□□□□ 0.25
RFC1P35251 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RFC1P35251 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFC1P35251 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFC1P35251 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RFC1P35251 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RFC1P35251 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFC1P35251 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RFC1P35251 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFC1P35251 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.62■□□□□ 0.25
RFC1P35251 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
RFC1P35251 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.61■□□□□ 0.25
RFC1P35251 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RFC1P35251 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.61■□□□□ 0.25
RFC1P35251 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.61■□□□□ 0.25
RFC1P35251 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.61■□□□□ 0.25
RFC1P35251 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.61■□□□□ 0.25
RFC1P35251 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RFC1P35251 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.61■□□□□ 0.25
RFC1P35251 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RFC1P35251 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RFC1P35251 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RFC1P35251 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.61■□□□□ 0.25
RFC1P35251 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 KLF2P3-201ENST00000451977 1087 ntBASIC16.61■□□□□ 0.25
RFC1P35251 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.61■□□□□ 0.25
RFC1P35251 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFC1P35251 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.61■□□□□ 0.25
RFC1P35251 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.61■□□□□ 0.25
RFC1P35251 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.61■□□□□ 0.25
RFC1P35251 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.61■□□□□ 0.25
RFC1P35251 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.61■□□□□ 0.25
RFC1P35251 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms