Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA3P32297 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA3P32297 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA3P32297 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CHRNA3P32297 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNA3P32297 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA3P32297 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.65■□□□□ 0.26
CHRNA3P32297 MIR770-201ENST00000390219 98 ntBASIC16.65■□□□□ 0.26
CHRNA3P32297 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.65■□□□□ 0.26
CHRNA3P32297 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNA3P32297 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA3P32297 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHRNA3P32297 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA3P32297 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA3P32297 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.65■□□□□ 0.26
CHRNA3P32297 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA3P32297 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA3P32297 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA3P32297 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA3P32297 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA3P32297 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHRNA3P32297 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA3P32297 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA3P32297 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA3P32297 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CHRNA3P32297 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA3P32297 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA3P32297 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA3P32297 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA3P32297 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA3P32297 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA3P32297 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA3P32297 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA3P32297 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.64■□□□□ 0.25
CHRNA3P32297 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNA3P32297 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNA3P32297 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
CHRNA3P32297 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.64■□□□□ 0.25
CHRNA3P32297 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.64■□□□□ 0.25
CHRNA3P32297 MIR6080-201ENST00000617359 66 ntBASIC16.64■□□□□ 0.25
CHRNA3P32297 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CHRNA3P32297 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CHRNA3P32297 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA3P32297 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CHRNA3P32297 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA3P32297 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNA3P32297 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CHRNA3P32297 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA3P32297 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA3P32297 FOXO1B-201ENST00000504678 1527 ntBASIC16.64■□□□□ 0.25
CHRNA3P32297 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA3P32297 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA3P32297 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.64■□□□□ 0.25
CHRNA3P32297 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA3P32297 AP3S2-216ENST00000617003 1561 ntBASIC16.64■□□□□ 0.25
CHRNA3P32297 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA3P32297 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA3P32297 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA3P32297 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA3P32297 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.63■□□□□ 0.25
CHRNA3P32297 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA3P32297 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA3P32297 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CHRNA3P32297 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA3P32297 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA3P32297 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.63■□□□□ 0.25
CHRNA3P32297 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA3P32297 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA3P32297 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CHRNA3P32297 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CHRNA3P32297 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CHRNA3P32297 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CHRNA3P32297 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA3P32297 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA3P32297 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA3P32297 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA3P32297 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA3P32297 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA3P32297 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.63■□□□□ 0.25
CHRNA3P32297 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.63■□□□□ 0.25
CHRNA3P32297 DUX4L27-201ENST00000554796 1261 ntBASIC16.63■□□□□ 0.25
CHRNA3P32297 AC051619.7-201ENST00000568314 623 ntBASIC16.63■□□□□ 0.25
CHRNA3P32297 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.63■□□□□ 0.25
CHRNA3P32297 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.63■□□□□ 0.25
CHRNA3P32297 SPTSSB-204ENST00000617024 1292 ntBASIC16.63■□□□□ 0.25
CHRNA3P32297 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA3P32297 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA3P32297 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.63■□□□□ 0.25
CHRNA3P32297 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.63■□□□□ 0.25
CHRNA3P32297 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.63■□□□□ 0.25
CHRNA3P32297 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.63■□□□□ 0.25
CHRNA3P32297 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.63■□□□□ 0.25
CHRNA3P32297 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.63■□□□□ 0.25
CHRNA3P32297 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA3P32297 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA3P32297 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA3P32297 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CHRNA3P32297 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA3P32297 LINC01101-201ENST00000622953 1884 ntBASIC16.63■□□□□ 0.25
CHRNA3P32297 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms