Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ITGA6P23229 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.24■□□□□ 0.67
ITGA6P23229 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.24■□□□□ 0.67
ITGA6P23229 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA6P23229 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.23■□□□□ 0.67
ITGA6P23229 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.23■□□□□ 0.67
ITGA6P23229 AC099398.1-201ENST00000567919 2776 ntBASIC19.23■□□□□ 0.67
ITGA6P23229 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA6P23229 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA6P23229 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA6P23229 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA6P23229 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA6P23229 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ITGA6P23229 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.23■□□□□ 0.67
ITGA6P23229 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ITGA6P23229 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ITGA6P23229 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.23■□□□□ 0.67
ITGA6P23229 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
ITGA6P23229 FO681548.1-201ENST00000455617 1132 ntBASIC19.23■□□□□ 0.67
ITGA6P23229 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
ITGA6P23229 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.23■□□□□ 0.67
ITGA6P23229 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.23■□□□□ 0.67
ITGA6P23229 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.23■□□□□ 0.67
ITGA6P23229 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.23■□□□□ 0.67
ITGA6P23229 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ITGA6P23229 AL583810.1-201ENST00000553344 1045 ntBASIC19.23■□□□□ 0.67
ITGA6P23229 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.23■□□□□ 0.67
ITGA6P23229 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.23■□□□□ 0.67
ITGA6P23229 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC19.23■□□□□ 0.67
ITGA6P23229 AP005019.2-201ENST00000615104 511 ntBASIC19.23■□□□□ 0.67
ITGA6P23229 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA6P23229 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.23■□□□□ 0.67
ITGA6P23229 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA6P23229 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA6P23229 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ITGA6P23229 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.23■□□□□ 0.67
ITGA6P23229 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA6P23229 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC19.23■□□□□ 0.67
ITGA6P23229 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ITGA6P23229 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA6P23229 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.22■□□□□ 0.67
ITGA6P23229 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
ITGA6P23229 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA6P23229 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA6P23229 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.22■□□□□ 0.67
ITGA6P23229 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA6P23229 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.22■□□□□ 0.67
ITGA6P23229 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA6P23229 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.22■□□□□ 0.67
ITGA6P23229 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA6P23229 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA6P23229 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ITGA6P23229 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ITGA6P23229 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.22■□□□□ 0.67
ITGA6P23229 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.22■□□□□ 0.67
ITGA6P23229 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA6P23229 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.22■□□□□ 0.67
ITGA6P23229 AC092658.1-201ENST00000505836 891 ntBASIC19.22■□□□□ 0.67
ITGA6P23229 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.22■□□□□ 0.67
ITGA6P23229 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.22■□□□□ 0.67
ITGA6P23229 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.22■□□□□ 0.67
ITGA6P23229 KRT90P-201ENST00000549264 1064 ntBASIC19.22■□□□□ 0.67
ITGA6P23229 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA6P23229 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA6P23229 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA6P23229 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA6P23229 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA6P23229 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA6P23229 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA6P23229 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITGA6P23229 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITGA6P23229 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITGA6P23229 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ITGA6P23229 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITGA6P23229 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.21■□□□□ 0.67
ITGA6P23229 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ITGA6P23229 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.21■□□□□ 0.67
ITGA6P23229 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITGA6P23229 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.21■□□□□ 0.67
ITGA6P23229 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITGA6P23229 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.21■□□□□ 0.67
ITGA6P23229 AC127383.1-201ENST00000444697 1800 ntBASIC19.21■□□□□ 0.67
ITGA6P23229 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITGA6P23229 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITGA6P23229 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITGA6P23229 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.21■□□□□ 0.67
ITGA6P23229 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ITGA6P23229 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.21■□□□□ 0.67
ITGA6P23229 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ITGA6P23229 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.21■□□□□ 0.67
ITGA6P23229 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ITGA6P23229 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.21■□□□□ 0.67
ITGA6P23229 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ITGA6P23229 BX539320.1-201ENST00000623759 877 ntBASIC19.21■□□□□ 0.67
ITGA6P23229 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.21■□□□□ 0.67
ITGA6P23229 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.21■□□□□ 0.67
ITGA6P23229 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITGA6P23229 AC092127.1-201ENST00000567093 3455 ntBASIC19.21■□□□□ 0.67
ITGA6P23229 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITGA6P23229 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms