Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.68□□□□□ -0.06
TNFRSF1BP20333 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 RNA5SP416-201ENST00000516838 111 ntBASIC14.67□□□□□ -0.06
TNFRSF1BP20333 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 AL450472.2-201ENST00000603663 1156 ntBASIC14.67□□□□□ -0.06
TNFRSF1BP20333 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 AC026748.1-201ENST00000624349 3251 ntBASIC14.67□□□□□ -0.06
TNFRSF1BP20333 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFRSF1BP20333 AKAP8P1-201ENST00000434743 1349 ntBASIC14.66□□□□□ -0.06
TNFRSF1BP20333 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 AC126365.1-201ENST00000578585 1514 ntBASIC14.66□□□□□ -0.06
TNFRSF1BP20333 FAM45BP-202ENST00000592932 1624 ntBASIC14.66□□□□□ -0.06
TNFRSF1BP20333 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 LINC00552-201ENST00000625151 2579 ntBASIC14.66□□□□□ -0.06
TNFRSF1BP20333 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 AC023274.1-201ENST00000418278 595 ntBASIC14.66□□□□□ -0.06
TNFRSF1BP20333 AL590627.1-203ENST00000421194 1026 ntBASIC14.66□□□□□ -0.06
TNFRSF1BP20333 MED15P5-201ENST00000423150 992 ntBASIC14.66□□□□□ -0.06
TNFRSF1BP20333 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 FAM58CP-201ENST00000435741 640 ntBASIC14.66□□□□□ -0.06
TNFRSF1BP20333 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 KRT8P37-201ENST00000451609 1420 ntBASIC14.66□□□□□ -0.06
TNFRSF1BP20333 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 AC139749.1-202ENST00000617529 3139 ntBASIC14.66□□□□□ -0.06
TNFRSF1BP20333 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFRSF1BP20333 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms