Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT4P19013 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT4P19013 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT4P19013 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT4P19013 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT4P19013 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.86■□□□□ 0.13
KRT4P19013 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT4P19013 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT4P19013 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT4P19013 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT4P19013 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
KRT4P19013 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT4P19013 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT4P19013 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT4P19013 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.86■□□□□ 0.13
KRT4P19013 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.86■□□□□ 0.13
KRT4P19013 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.86■□□□□ 0.13
KRT4P19013 AC009947.1-201ENST00000444350 727 ntBASIC15.86■□□□□ 0.13
KRT4P19013 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.86■□□□□ 0.13
KRT4P19013 UNC93B6-202ENST00000528242 690 ntBASIC15.86■□□□□ 0.13
KRT4P19013 AC061975.2-201ENST00000581722 295 ntBASIC15.86■□□□□ 0.13
KRT4P19013 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
KRT4P19013 AC007064.4-201ENST00000637740 555 ntBASIC15.86■□□□□ 0.13
KRT4P19013 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT4P19013 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT4P19013 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.86■□□□□ 0.13
KRT4P19013 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT4P19013 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.86■□□□□ 0.13
KRT4P19013 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT4P19013 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT4P19013 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
KRT4P19013 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT4P19013 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
KRT4P19013 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT4P19013 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT4P19013 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT4P19013 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT4P19013 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT4P19013 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
KRT4P19013 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
KRT4P19013 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
KRT4P19013 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT4P19013 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT4P19013 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT4P19013 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT4P19013 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT4P19013 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT4P19013 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.85■□□□□ 0.13
KRT4P19013 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.85■□□□□ 0.13
KRT4P19013 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT4P19013 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.85■□□□□ 0.13
KRT4P19013 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT4P19013 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
KRT4P19013 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.85■□□□□ 0.13
KRT4P19013 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT4P19013 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT4P19013 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
KRT4P19013 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT4P19013 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT4P19013 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
KRT4P19013 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT4P19013 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT4P19013 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT4P19013 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.85■□□□□ 0.13
KRT4P19013 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT4P19013 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT4P19013 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT4P19013 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
KRT4P19013 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT4P19013 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT4P19013 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
KRT4P19013 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT4P19013 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT4P19013 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT4P19013 ZBED1P1-201ENST00000502364 1930 ntBASIC15.84■□□□□ 0.13
KRT4P19013 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT4P19013 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT4P19013 AC004987.2-201ENST00000395959 1148 ntBASIC15.84■□□□□ 0.13
KRT4P19013 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.84■□□□□ 0.13
KRT4P19013 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT4P19013 AC098831.1-202ENST00000438821 336 ntBASIC15.84■□□□□ 0.13
KRT4P19013 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KRT4P19013 EMBP1-201ENST00000458200 901 ntBASIC15.84■□□□□ 0.13
KRT4P19013 AC098859.1-201ENST00000502915 1238 ntBASIC15.84■□□□□ 0.13
KRT4P19013 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT4P19013 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KRT4P19013 AC024267.1-201ENST00000582320 895 ntBASIC15.84■□□□□ 0.13
KRT4P19013 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT4P19013 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT4P19013 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT4P19013 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
KRT4P19013 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT4P19013 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
KRT4P19013 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT4P19013 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT4P19013 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
KRT4P19013 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT4P19013 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.84■□□□□ 0.13
KRT4P19013 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT4P19013 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms