Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFRAP16234 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 TSSK5P-201ENST00000423978 907 ntBASIC16.53■□□□□ 0.24
PDGFRAP16234 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFRAP16234 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.53■□□□□ 0.24
PDGFRAP16234 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.53■□□□□ 0.24
PDGFRAP16234 AC004890.2-204ENST00000481968 304 ntBASIC16.53■□□□□ 0.24
PDGFRAP16234 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.53■□□□□ 0.24
PDGFRAP16234 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFRAP16234 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.53■□□□□ 0.24
PDGFRAP16234 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFRAP16234 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFRAP16234 AC010336.2-201ENST00000564226 506 ntBASIC16.53■□□□□ 0.24
PDGFRAP16234 AC025048.3-201ENST00000590609 569 ntBASIC16.53■□□□□ 0.24
PDGFRAP16234 AC005702.4-201ENST00000618393 416 ntBASIC16.53■□□□□ 0.24
PDGFRAP16234 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFRAP16234 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PDGFRAP16234 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFRAP16234 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.53■□□□□ 0.24
PDGFRAP16234 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDGFRAP16234 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.53■□□□□ 0.24
PDGFRAP16234 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFRAP16234 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFRAP16234 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFRAP16234 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFRAP16234 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PDGFRAP16234 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.52■□□□□ 0.24
PDGFRAP16234 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.52■□□□□ 0.24
PDGFRAP16234 PPT1-215ENST00000641471 2368 ntBASIC16.52■□□□□ 0.24
PDGFRAP16234 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.52■□□□□ 0.24
PDGFRAP16234 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFRAP16234 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFRAP16234 AC087499.5-201ENST00000452760 1342 ntBASIC16.52■□□□□ 0.24
PDGFRAP16234 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFRAP16234 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
PDGFRAP16234 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFRAP16234 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFRAP16234 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
PDGFRAP16234 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFRAP16234 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
PDGFRAP16234 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFRAP16234 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFRAP16234 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFRAP16234 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.52■□□□□ 0.24
PDGFRAP16234 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.52■□□□□ 0.24
PDGFRAP16234 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.52■□□□□ 0.24
PDGFRAP16234 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.52■□□□□ 0.24
PDGFRAP16234 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.52■□□□□ 0.24
PDGFRAP16234 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.52■□□□□ 0.24
PDGFRAP16234 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.52■□□□□ 0.24
PDGFRAP16234 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.52■□□□□ 0.24
PDGFRAP16234 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.52■□□□□ 0.24
PDGFRAP16234 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.52■□□□□ 0.24
PDGFRAP16234 MIR4745-201ENST00000577608 62 ntBASIC16.52■□□□□ 0.24
PDGFRAP16234 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFRAP16234 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDGFRAP16234 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
PDGFRAP16234 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
PDGFRAP16234 TMBIM7P-203ENST00000641617 1718 ntBASIC16.52■□□□□ 0.24
PDGFRAP16234 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.52■□□□□ 0.23
PDGFRAP16234 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.52■□□□□ 0.23
PDGFRAP16234 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.52■□□□□ 0.23
PDGFRAP16234 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PDGFRAP16234 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
PDGFRAP16234 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PDGFRAP16234 Z97205.2-201ENST00000564697 1639 ntBASIC16.52■□□□□ 0.23
PDGFRAP16234 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.52■□□□□ 0.23
PDGFRAP16234 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.52■□□□□ 0.23
PDGFRAP16234 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFRAP16234 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PDGFRAP16234 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFRAP16234 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.51■□□□□ 0.23
PDGFRAP16234 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFRAP16234 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFRAP16234 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PDGFRAP16234 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.51■□□□□ 0.23
PDGFRAP16234 AC022532.1-201ENST00000624563 1728 ntBASIC16.51■□□□□ 0.23
PDGFRAP16234 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.51■□□□□ 0.23
PDGFRAP16234 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.51■□□□□ 0.23
PDGFRAP16234 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.51■□□□□ 0.23
PDGFRAP16234 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFRAP16234 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFRAP16234 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
PDGFRAP16234 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.51■□□□□ 0.23
PDGFRAP16234 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDGFRAP16234 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms