Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 AC025048.3-201ENST00000590609 569 ntBASIC13.75□□□□□ -0.21
CCL2P13500 AC005702.4-201ENST00000618393 416 ntBASIC13.75□□□□□ -0.21
CCL2P13500 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL2P13500 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.75□□□□□ -0.21
CCL2P13500 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL2P13500 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CCL2P13500 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.75□□□□□ -0.21
CCL2P13500 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.75□□□□□ -0.21
CCL2P13500 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL2P13500 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.75□□□□□ -0.21
CCL2P13500 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL2P13500 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL2P13500 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL2P13500 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL2P13500 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.75□□□□□ -0.21
CCL2P13500 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL2P13500 AC126755.1-201ENST00000525846 6405 ntBASIC13.75□□□□□ -0.21
CCL2P13500 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL2P13500 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.75□□□□□ -0.21
CCL2P13500 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CCL2P13500 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.74□□□□□ -0.21
CCL2P13500 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL2P13500 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CCL2P13500 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL2P13500 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL2P13500 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL2P13500 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL2P13500 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CCL2P13500 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL2P13500 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CCL2P13500 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL2P13500 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
CCL2P13500 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.74□□□□□ -0.21
CCL2P13500 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL2P13500 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL2P13500 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL2P13500 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL2P13500 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL2P13500 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL2P13500 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.74□□□□□ -0.21
CCL2P13500 AC009407.1-201ENST00000568958 598 ntBASIC13.74□□□□□ -0.21
CCL2P13500 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.74□□□□□ -0.21
CCL2P13500 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.74□□□□□ -0.21
CCL2P13500 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.74□□□□□ -0.21
CCL2P13500 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL2P13500 AC008738.7-201ENST00000609744 511 ntBASIC13.74□□□□□ -0.21
CCL2P13500 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
CCL2P13500 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
CCL2P13500 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 AC022144.1-201ENST00000602255 1580 ntBASIC13.74□□□□□ -0.21
CCL2P13500 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL2P13500 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL2P13500 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.73□□□□□ -0.21
CCL2P13500 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.73□□□□□ -0.21
CCL2P13500 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL2P13500 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.73□□□□□ -0.21
CCL2P13500 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
CCL2P13500 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL2P13500 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL2P13500 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CCL2P13500 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.73□□□□□ -0.21
CCL2P13500 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.73□□□□□ -0.21
CCL2P13500 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL2P13500 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.73□□□□□ -0.21
CCL2P13500 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL2P13500 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CCL2P13500 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.73□□□□□ -0.21
CCL2P13500 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL2P13500 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CCL2P13500 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CCL2P13500 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms