Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 PHKG1P2-201ENST00000457537 863 ntBASIC17.11■□□□□ 0.33
CCDC172P0C7W6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC172P0C7W6 CYP4F24P-201ENST00000586049 1580 ntBASIC17.11■□□□□ 0.33
CCDC172P0C7W6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 AL592309.1-201ENST00000443127 649 ntBASIC17.1■□□□□ 0.33
CCDC172P0C7W6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 AL136982.4-201ENST00000437689 1740 ntBASIC17.1■□□□□ 0.33
CCDC172P0C7W6 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC172P0C7W6 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 AC092127.1-201ENST00000567093 3455 ntBASIC17.09■□□□□ 0.33
CCDC172P0C7W6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 HTR5BP-201ENST00000430851 1154 ntBASIC17.09■□□□□ 0.33
CCDC172P0C7W6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 EEF1DP4-201ENST00000446006 880 ntBASIC17.09■□□□□ 0.33
CCDC172P0C7W6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 MIR4313-201ENST00000580760 101 ntBASIC17.09■□□□□ 0.33
CCDC172P0C7W6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 AP3S2-216ENST00000617003 1561 ntBASIC17.09■□□□□ 0.33
CCDC172P0C7W6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC172P0C7W6 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms