Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.28□□□□□ -0.12
FREM3P0C091 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.28□□□□□ -0.12
FREM3P0C091 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 TMEM14DP-201ENST00000422205 345 ntBASIC14.28□□□□□ -0.12
FREM3P0C091 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.28□□□□□ -0.12
FREM3P0C091 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.28□□□□□ -0.12
FREM3P0C091 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.28□□□□□ -0.12
FREM3P0C091 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.28□□□□□ -0.12
FREM3P0C091 AC074044.1-201ENST00000609673 707 ntBASIC14.28□□□□□ -0.12
FREM3P0C091 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.28□□□□□ -0.12
FREM3P0C091 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
FREM3P0C091 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
FREM3P0C091 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
FREM3P0C091 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.28□□□□□ -0.12
FREM3P0C091 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.28□□□□□ -0.12
FREM3P0C091 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.28□□□□□ -0.12
FREM3P0C091 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FREM3P0C091 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.27□□□□□ -0.12
FREM3P0C091 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
FREM3P0C091 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FREM3P0C091 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.27□□□□□ -0.12
FREM3P0C091 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
FREM3P0C091 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.27□□□□□ -0.12
FREM3P0C091 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
FREM3P0C091 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.27□□□□□ -0.12
FREM3P0C091 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.27□□□□□ -0.12
FREM3P0C091 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FREM3P0C091 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.27□□□□□ -0.12
FREM3P0C091 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.27□□□□□ -0.12
FREM3P0C091 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.27□□□□□ -0.12
FREM3P0C091 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FREM3P0C091 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
FREM3P0C091 AC136621.1-201ENST00000624017 2304 ntBASIC14.27□□□□□ -0.12
FREM3P0C091 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FREM3P0C091 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
FREM3P0C091 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FREM3P0C091 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
FREM3P0C091 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FREM3P0C091 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FREM3P0C091 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.27□□□□□ -0.12
FREM3P0C091 AC103702.1-201ENST00000548801 2630 ntBASIC14.27□□□□□ -0.12
FREM3P0C091 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.27□□□□□ -0.12
FREM3P0C091 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FREM3P0C091 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FREM3P0C091 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.27□□□□□ -0.13
FREM3P0C091 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FREM3P0C091 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
FREM3P0C091 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
FREM3P0C091 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
FREM3P0C091 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
FREM3P0C091 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FREM3P0C091 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
FREM3P0C091 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
FREM3P0C091 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
FREM3P0C091 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.27□□□□□ -0.13
FREM3P0C091 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
FREM3P0C091 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FREM3P0C091 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
FREM3P0C091 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.27□□□□□ -0.13
FREM3P0C091 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.27□□□□□ -0.13
FREM3P0C091 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.27□□□□□ -0.13
FREM3P0C091 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
FREM3P0C091 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.27□□□□□ -0.13
FREM3P0C091 BRI3BPP1-201ENST00000594224 787 ntBASIC14.27□□□□□ -0.13
FREM3P0C091 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.27□□□□□ -0.13
FREM3P0C091 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FREM3P0C091 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.27□□□□□ -0.13
FREM3P0C091 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.27□□□□□ -0.13
FREM3P0C091 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FREM3P0C091 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.27□□□□□ -0.13
FREM3P0C091 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FREM3P0C091 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
FREM3P0C091 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.27□□□□□ -0.13
FREM3P0C091 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.27□□□□□ -0.13
FREM3P0C091 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FREM3P0C091 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FREM3P0C091 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FREM3P0C091 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FREM3P0C091 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.26□□□□□ -0.13
FREM3P0C091 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FREM3P0C091 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.26□□□□□ -0.13
FREM3P0C091 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FREM3P0C091 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
FREM3P0C091 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
FREM3P0C091 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FREM3P0C091 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
FREM3P0C091 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FREM3P0C091 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms