Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM2P07951 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TPM2P07951 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC18.04■□□□□ 0.48
TPM2P07951 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.03■□□□□ 0.48
TPM2P07951 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TPM2P07951 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.03■□□□□ 0.48
TPM2P07951 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC18.03■□□□□ 0.48
TPM2P07951 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
TPM2P07951 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TPM2P07951 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.03■□□□□ 0.48
TPM2P07951 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.03■□□□□ 0.48
TPM2P07951 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.03■□□□□ 0.48
TPM2P07951 FAM197Y8-203ENST00000450145 560 ntBASIC18.03■□□□□ 0.48
TPM2P07951 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.03■□□□□ 0.48
TPM2P07951 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.03■□□□□ 0.48
TPM2P07951 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.03■□□□□ 0.48
TPM2P07951 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.03■□□□□ 0.48
TPM2P07951 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
TPM2P07951 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.03■□□□□ 0.48
TPM2P07951 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TPM2P07951 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TPM2P07951 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
TPM2P07951 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.03■□□□□ 0.48
TPM2P07951 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TPM2P07951 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM2P07951 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM2P07951 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TPM2P07951 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM2P07951 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM2P07951 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.48
TPM2P07951 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM2P07951 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TPM2P07951 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM2P07951 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.02■□□□□ 0.48
TPM2P07951 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM2P07951 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM2P07951 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM2P07951 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM2P07951 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM2P07951 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM2P07951 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM2P07951 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM2P07951 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TPM2P07951 AC108073.2-201ENST00000464002 357 ntBASIC18.02■□□□□ 0.48
TPM2P07951 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.02■□□□□ 0.48
TPM2P07951 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.02■□□□□ 0.48
TPM2P07951 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.02■□□□□ 0.48
TPM2P07951 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.02■□□□□ 0.48
TPM2P07951 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.02■□□□□ 0.48
TPM2P07951 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC18.02■□□□□ 0.48
TPM2P07951 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.02■□□□□ 0.48
TPM2P07951 AC004790.2-201ENST00000623588 572 ntBASIC18.02■□□□□ 0.48
TPM2P07951 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TPM2P07951 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM2P07951 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TPM2P07951 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TPM2P07951 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TPM2P07951 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TPM2P07951 GALC-206ENST00000544807 2528 ntTSL 2 BASIC18.02■□□□□ 0.47
TPM2P07951 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TPM2P07951 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.02■□□□□ 0.47
TPM2P07951 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TPM2P07951 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TPM2P07951 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM2P07951 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TPM2P07951 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TPM2P07951 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM2P07951 AL023775.1-201ENST00000454907 1746 ntBASIC18.01■□□□□ 0.47
TPM2P07951 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM2P07951 MROH4P-201ENST00000431302 1578 ntBASIC18.01■□□□□ 0.47
TPM2P07951 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC18.01■□□□□ 0.47
TPM2P07951 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM2P07951 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM2P07951 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM2P07951 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM2P07951 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TPM2P07951 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.01■□□□□ 0.47
TPM2P07951 PMS2P4-201ENST00000412466 1052 ntBASIC18.01■□□□□ 0.47
TPM2P07951 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM2P07951 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.01■□□□□ 0.47
TPM2P07951 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms