Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TPM3P06753 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TPM3P06753 AC041040.2-201ENST00000622926 2899 ntBASIC17.73■□□□□ 0.43
TPM3P06753 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TPM3P06753 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TPM3P06753 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TPM3P06753 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.73■□□□□ 0.43
TPM3P06753 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TPM3P06753 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TPM3P06753 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.73■□□□□ 0.43
TPM3P06753 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.73■□□□□ 0.43
TPM3P06753 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TPM3P06753 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TPM3P06753 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TPM3P06753 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TPM3P06753 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TPM3P06753 AL513480.1-201ENST00000451731 511 ntBASIC17.73■□□□□ 0.43
TPM3P06753 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.73■□□□□ 0.43
TPM3P06753 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.73■□□□□ 0.43
TPM3P06753 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.73■□□□□ 0.43
TPM3P06753 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.73■□□□□ 0.43
TPM3P06753 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.73■□□□□ 0.43
TPM3P06753 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.73■□□□□ 0.43
TPM3P06753 AC004790.2-201ENST00000623588 572 ntBASIC17.73■□□□□ 0.43
TPM3P06753 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TPM3P06753 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TPM3P06753 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TPM3P06753 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TPM3P06753 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TPM3P06753 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.73■□□□□ 0.43
TPM3P06753 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
TPM3P06753 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TPM3P06753 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TPM3P06753 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TPM3P06753 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TPM3P06753 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TPM3P06753 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC17.72■□□□□ 0.43
TPM3P06753 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.72■□□□□ 0.43
TPM3P06753 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TPM3P06753 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TPM3P06753 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TPM3P06753 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.72■□□□□ 0.43
TPM3P06753 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TPM3P06753 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.72■□□□□ 0.43
TPM3P06753 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.72■□□□□ 0.43
TPM3P06753 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.72■□□□□ 0.43
TPM3P06753 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.72■□□□□ 0.43
TPM3P06753 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TPM3P06753 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
TPM3P06753 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.72■□□□□ 0.43
TPM3P06753 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TPM3P06753 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TPM3P06753 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.71■□□□□ 0.43
TPM3P06753 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TPM3P06753 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC17.71■□□□□ 0.43
TPM3P06753 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TPM3P06753 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TPM3P06753 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TPM3P06753 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TPM3P06753 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.71■□□□□ 0.43
TPM3P06753 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
TPM3P06753 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.71■□□□□ 0.43
TPM3P06753 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TPM3P06753 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.71■□□□□ 0.43
TPM3P06753 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TPM3P06753 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TPM3P06753 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TPM3P06753 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TPM3P06753 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TPM3P06753 ZBED1P1-201ENST00000502364 1930 ntBASIC17.71■□□□□ 0.43
TPM3P06753 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.71■□□□□ 0.43
TPM3P06753 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TPM3P06753 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TPM3P06753 AKR1C7P-201ENST00000305623 895 ntBASIC17.71■□□□□ 0.43
TPM3P06753 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TPM3P06753 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TPM3P06753 PRSS29P-201ENST00000440800 595 ntBASIC17.71■□□□□ 0.43
TPM3P06753 HCG4P8-203ENST00000443049 980 ntBASIC17.71■□□□□ 0.43
TPM3P06753 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.71■□□□□ 0.43
TPM3P06753 AF238378.1-201ENST00000526806 358 ntBASIC17.71■□□□□ 0.43
TPM3P06753 AC109635.5-201ENST00000533593 962 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms