Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.26□□□□□ -0.29
ABCA1O95477 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 AL136982.4-201ENST00000437689 1740 ntBASIC13.26□□□□□ -0.29
ABCA1O95477 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.26□□□□□ -0.29
ABCA1O95477 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.26□□□□□ -0.29
ABCA1O95477 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.26□□□□□ -0.29
ABCA1O95477 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
ABCA1O95477 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ABCA1O95477 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ABCA1O95477 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ABCA1O95477 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ABCA1O95477 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ABCA1O95477 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 AC006449.5-201ENST00000610658 2098 ntBASIC13.25□□□□□ -0.29
ABCA1O95477 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.25□□□□□ -0.29
ABCA1O95477 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ABCA1O95477 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ABCA1O95477 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.25□□□□□ -0.29
ABCA1O95477 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.25□□□□□ -0.29
ABCA1O95477 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
ABCA1O95477 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.25□□□□□ -0.29
ABCA1O95477 AC036164.1-201ENST00000570544 333 ntBASIC13.25□□□□□ -0.29
ABCA1O95477 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.25□□□□□ -0.29
ABCA1O95477 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 AL139011.1-202ENST00000642063 584 ntBASIC13.25□□□□□ -0.29
ABCA1O95477 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ABCA1O95477 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.25□□□□□ -0.29
ABCA1O95477 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ABCA1O95477 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
ABCA1O95477 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.25□□□□□ -0.29
ABCA1O95477 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.25□□□□□ -0.29
ABCA1O95477 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.25□□□□□ -0.29
ABCA1O95477 AL512652.2-201ENST00000625156 1716 ntBASIC13.25□□□□□ -0.29
ABCA1O95477 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ABCA1O95477 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.25□□□□□ -0.29
ABCA1O95477 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.25□□□□□ -0.29
ABCA1O95477 AC093525.8-201ENST00000624099 1342 ntBASIC13.25□□□□□ -0.29
ABCA1O95477 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.25□□□□□ -0.29
ABCA1O95477 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.25□□□□□ -0.29
ABCA1O95477 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
ABCA1O95477 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
ABCA1O95477 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.25□□□□□ -0.29
ABCA1O95477 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.25□□□□□ -0.29
ABCA1O95477 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.25□□□□□ -0.29
ABCA1O95477 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.25□□□□□ -0.29
ABCA1O95477 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.25□□□□□ -0.29
ABCA1O95477 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.25□□□□□ -0.29
ABCA1O95477 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.25□□□□□ -0.29
ABCA1O95477 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ABCA1O95477 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ABCA1O95477 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ABCA1O95477 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.24□□□□□ -0.29
ABCA1O95477 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.24□□□□□ -0.29
ABCA1O95477 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.24□□□□□ -0.29
ABCA1O95477 KRT43P-201ENST00000434019 910 ntBASIC13.24□□□□□ -0.29
ABCA1O95477 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
ABCA1O95477 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.24□□□□□ -0.29
ABCA1O95477 TIMM17BP1-201ENST00000545713 516 ntBASIC13.24□□□□□ -0.29
ABCA1O95477 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ABCA1O95477 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
ABCA1O95477 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.24□□□□□ -0.29
ABCA1O95477 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ABCA1O95477 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.24□□□□□ -0.29
ABCA1O95477 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.24□□□□□ -0.29
ABCA1O95477 GPAA1P2-202ENST00000606848 1787 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms