Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
GPC4O75487 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
GPC4O75487 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.87■□□□□ 0.13
GPC4O75487 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
GPC4O75487 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
GPC4O75487 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC4O75487 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GPC4O75487 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
GPC4O75487 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GPC4O75487 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GPC4O75487 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GPC4O75487 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GPC4O75487 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.86■□□□□ 0.13
GPC4O75487 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.86■□□□□ 0.13
GPC4O75487 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GPC4O75487 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GPC4O75487 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GPC4O75487 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
GPC4O75487 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GPC4O75487 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GPC4O75487 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.86■□□□□ 0.13
GPC4O75487 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GPC4O75487 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
GPC4O75487 AL139400.1-201ENST00000366220 510 ntBASIC15.86■□□□□ 0.13
GPC4O75487 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GPC4O75487 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
GPC4O75487 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.86■□□□□ 0.13
GPC4O75487 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.86■□□□□ 0.13
GPC4O75487 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GPC4O75487 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
GPC4O75487 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GPC4O75487 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.86■□□□□ 0.13
GPC4O75487 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.86■□□□□ 0.13
GPC4O75487 AC018529.1-201ENST00000613063 361 ntBASIC15.86■□□□□ 0.13
GPC4O75487 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GPC4O75487 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
GPC4O75487 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.86■□□□□ 0.13
GPC4O75487 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.86■□□□□ 0.13
GPC4O75487 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GPC4O75487 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GPC4O75487 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.86■□□□□ 0.13
GPC4O75487 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GPC4O75487 AC006058.4-201ENST00000624016 1670 ntBASIC15.86■□□□□ 0.13
GPC4O75487 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.86■□□□□ 0.13
GPC4O75487 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.86■□□□□ 0.13
GPC4O75487 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GPC4O75487 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
GPC4O75487 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
GPC4O75487 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.85■□□□□ 0.13
GPC4O75487 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.85■□□□□ 0.13
GPC4O75487 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.85■□□□□ 0.13
GPC4O75487 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.85■□□□□ 0.13
GPC4O75487 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.85■□□□□ 0.13
GPC4O75487 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.85■□□□□ 0.13
GPC4O75487 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
GPC4O75487 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.85■□□□□ 0.13
GPC4O75487 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.85■□□□□ 0.13
GPC4O75487 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.85■□□□□ 0.13
GPC4O75487 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.85■□□□□ 0.13
GPC4O75487 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
GPC4O75487 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.85■□□□□ 0.13
GPC4O75487 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.85■□□□□ 0.13
GPC4O75487 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.85■□□□□ 0.13
GPC4O75487 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
GPC4O75487 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.85■□□□□ 0.13
GPC4O75487 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
GPC4O75487 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
GPC4O75487 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GPC4O75487 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
GPC4O75487 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.84■□□□□ 0.13
GPC4O75487 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GPC4O75487 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.84■□□□□ 0.13
GPC4O75487 PPT1-215ENST00000641471 2368 ntBASIC15.84■□□□□ 0.13
GPC4O75487 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GPC4O75487 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
GPC4O75487 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms