Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH16O75309 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.97■□□□□ 0.15
CDH16O75309 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH16O75309 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH16O75309 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH16O75309 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH16O75309 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH16O75309 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH16O75309 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH16O75309 AC004987.2-201ENST00000395959 1148 ntBASIC15.97■□□□□ 0.15
CDH16O75309 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.97■□□□□ 0.15
CDH16O75309 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.97■□□□□ 0.15
CDH16O75309 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CDH16O75309 AC024267.1-201ENST00000582320 895 ntBASIC15.97■□□□□ 0.15
CDH16O75309 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.97■□□□□ 0.15
CDH16O75309 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH16O75309 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH16O75309 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH16O75309 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.97■□□□□ 0.15
CDH16O75309 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH16O75309 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH16O75309 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH16O75309 MIR600HG-201ENST00000449175 5984 ntBASIC15.97■□□□□ 0.15
CDH16O75309 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CDH16O75309 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH16O75309 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH16O75309 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
CDH16O75309 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CDH16O75309 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH16O75309 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH16O75309 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH16O75309 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH16O75309 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH16O75309 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CDH16O75309 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH16O75309 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH16O75309 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH16O75309 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CDH16O75309 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH16O75309 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH16O75309 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CDH16O75309 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CDH16O75309 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.96■□□□□ 0.15
CDH16O75309 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH16O75309 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH16O75309 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH16O75309 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH16O75309 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH16O75309 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.96■□□□□ 0.15
CDH16O75309 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH16O75309 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH16O75309 FAM8A3P-201ENST00000427218 844 ntBASIC15.96■□□□□ 0.15
CDH16O75309 FDX1P1-201ENST00000449115 551 ntBASIC15.96■□□□□ 0.15
CDH16O75309 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.96■□□□□ 0.15
CDH16O75309 AC096734.2-201ENST00000562054 433 ntBASIC15.96■□□□□ 0.15
CDH16O75309 AP001005.1-201ENST00000571755 1248 ntBASIC15.96■□□□□ 0.15
CDH16O75309 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH16O75309 AC061975.2-201ENST00000581722 295 ntBASIC15.96■□□□□ 0.15
CDH16O75309 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH16O75309 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH16O75309 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CDH16O75309 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CDH16O75309 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH16O75309 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH16O75309 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH16O75309 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.96■□□□□ 0.14
CDH16O75309 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH16O75309 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.14
CDH16O75309 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.96■□□□□ 0.14
CDH16O75309 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.96■□□□□ 0.14
CDH16O75309 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH16O75309 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CDH16O75309 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH16O75309 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CDH16O75309 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH16O75309 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH16O75309 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.95■□□□□ 0.14
CDH16O75309 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH16O75309 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH16O75309 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH16O75309 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH16O75309 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CDH16O75309 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CDH16O75309 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH16O75309 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.95■□□□□ 0.14
CDH16O75309 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH16O75309 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
CDH16O75309 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH16O75309 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH16O75309 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH16O75309 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH16O75309 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH16O75309 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH16O75309 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH16O75309 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH16O75309 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.95■□□□□ 0.14
CDH16O75309 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH16O75309 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.95■□□□□ 0.14
CDH16O75309 RHOQP3-201ENST00000437982 621 ntBASIC15.95■□□□□ 0.14
CDH16O75309 AC098859.1-201ENST00000502915 1238 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms