Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 MTND6P24-201ENST00000440466 518 ntBASIC17.66■□□□□ 0.42
ACTN4O43707 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.66■□□□□ 0.42
ACTN4O43707 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.66■□□□□ 0.42
ACTN4O43707 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 AL079307.3-201ENST00000556114 283 ntBASIC17.66■□□□□ 0.42
ACTN4O43707 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
ACTN4O43707 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.66■□□□□ 0.42
ACTN4O43707 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
ACTN4O43707 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.66■□□□□ 0.42
ACTN4O43707 AC027612.4-201ENST00000605371 583 ntBASIC17.66■□□□□ 0.42
ACTN4O43707 MIR6080-201ENST00000617359 66 ntBASIC17.66■□□□□ 0.42
ACTN4O43707 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.66■□□□□ 0.42
ACTN4O43707 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
ACTN4O43707 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.66■□□□□ 0.42
ACTN4O43707 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ACTN4O43707 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
ACTN4O43707 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ACTN4O43707 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ACTN4O43707 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ACTN4O43707 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.65■□□□□ 0.42
ACTN4O43707 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ACTN4O43707 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.65■□□□□ 0.42
ACTN4O43707 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.65■□□□□ 0.42
ACTN4O43707 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.65■□□□□ 0.42
ACTN4O43707 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ACTN4O43707 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.65■□□□□ 0.42
ACTN4O43707 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ACTN4O43707 AL513477.1-201ENST00000602865 2407 ntBASIC17.65■□□□□ 0.42
ACTN4O43707 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ACTN4O43707 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 AC211486.1-202ENST00000416371 468 ntBASIC17.65■□□□□ 0.42
ACTN4O43707 AL080243.2-201ENST00000418783 582 ntBASIC17.65■□□□□ 0.42
ACTN4O43707 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.65■□□□□ 0.42
ACTN4O43707 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.65■□□□□ 0.42
ACTN4O43707 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 AC211476.1-201ENST00000503899 468 ntBASIC17.65■□□□□ 0.42
ACTN4O43707 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.65■□□□□ 0.42
ACTN4O43707 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.65■□□□□ 0.42
ACTN4O43707 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.65■□□□□ 0.42
ACTN4O43707 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.65■□□□□ 0.42
ACTN4O43707 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ACTN4O43707 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ACTN4O43707 AP002414.2-201ENST00000591780 3365 ntBASIC17.65■□□□□ 0.42
ACTN4O43707 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ACTN4O43707 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ACTN4O43707 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
ACTN4O43707 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.65■□□□□ 0.42
ACTN4O43707 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTN4O43707 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ACTN4O43707 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
ACTN4O43707 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ACTN4O43707 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.64■□□□□ 0.42
ACTN4O43707 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.64■□□□□ 0.42
ACTN4O43707 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.64■□□□□ 0.41
ACTN4O43707 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.64■□□□□ 0.41
ACTN4O43707 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ACTN4O43707 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms