Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APAF1O14727 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.67■□□□□ 0.9
APAF1O14727 AC015910.1-201ENST00000579400 975 ntBASIC20.67■□□□□ 0.9
APAF1O14727 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.67■□□□□ 0.9
APAF1O14727 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
APAF1O14727 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APAF1O14727 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APAF1O14727 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APAF1O14727 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
APAF1O14727 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APAF1O14727 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
APAF1O14727 CLK3P2-201ENST00000427566 1453 ntBASIC20.67■□□□□ 0.9
APAF1O14727 MYB-201ENST00000316528 3571 ntTSL 5 BASIC20.67■□□□□ 0.9
APAF1O14727 MYB-241ENST00000616088 3573 ntTSL 5 BASIC20.67■□□□□ 0.9
APAF1O14727 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
APAF1O14727 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
APAF1O14727 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APAF1O14727 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APAF1O14727 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
APAF1O14727 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC20.66■□□□□ 0.9
APAF1O14727 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APAF1O14727 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APAF1O14727 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
APAF1O14727 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APAF1O14727 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC20.66■□□□□ 0.9
APAF1O14727 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APAF1O14727 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APAF1O14727 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
APAF1O14727 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APAF1O14727 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APAF1O14727 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
APAF1O14727 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APAF1O14727 AC236430.1-201ENST00000402231 743 ntBASIC20.66■□□□□ 0.9
APAF1O14727 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APAF1O14727 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.66■□□□□ 0.9
APAF1O14727 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.66■□□□□ 0.9
APAF1O14727 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.66■□□□□ 0.9
APAF1O14727 LINC02560-201ENST00000596379 459 ntBASIC20.66■□□□□ 0.9
APAF1O14727 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
APAF1O14727 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APAF1O14727 AC138969.3-201ENST00000546612 1459 ntBASIC20.66■□□□□ 0.9
APAF1O14727 AC138932.2-201ENST00000548268 1459 ntBASIC20.66■□□□□ 0.9
APAF1O14727 AC126755.4-201ENST00000549796 1459 ntBASIC20.66■□□□□ 0.9
APAF1O14727 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APAF1O14727 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APAF1O14727 AC022532.1-201ENST00000624563 1728 ntBASIC20.66■□□□□ 0.9
APAF1O14727 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APAF1O14727 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APAF1O14727 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC20.66■□□□□ 0.9
APAF1O14727 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APAF1O14727 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
APAF1O14727 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
APAF1O14727 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
APAF1O14727 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APAF1O14727 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APAF1O14727 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APAF1O14727 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APAF1O14727 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
APAF1O14727 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
APAF1O14727 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC20.65■□□□□ 0.9
APAF1O14727 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC20.65■□□□□ 0.9
APAF1O14727 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APAF1O14727 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APAF1O14727 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
APAF1O14727 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC20.65■□□□□ 0.9
APAF1O14727 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
APAF1O14727 AMT-224ENST00000635808 1610 ntTSL 5 BASIC20.65■□□□□ 0.9
APAF1O14727 AC084364.1-201ENST00000551967 1556 ntBASIC20.65■□□□□ 0.9
APAF1O14727 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
APAF1O14727 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APAF1O14727 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APAF1O14727 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APAF1O14727 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.65■□□□□ 0.9
APAF1O14727 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
APAF1O14727 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
APAF1O14727 AC002472.2-201ENST00000442739 958 ntBASIC20.65■□□□□ 0.9
APAF1O14727 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.65■□□□□ 0.9
APAF1O14727 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
APAF1O14727 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APAF1O14727 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APAF1O14727 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC20.65■□□□□ 0.9
APAF1O14727 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APAF1O14727 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APAF1O14727 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC20.65■□□□□ 0.9
APAF1O14727 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
APAF1O14727 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APAF1O14727 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
APAF1O14727 ING5-213ENST00000636051 4199 ntTSL 5 BASIC20.64■□□□□ 0.9
APAF1O14727 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
APAF1O14727 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
APAF1O14727 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
APAF1O14727 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
APAF1O14727 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
APAF1O14727 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.64■□□□□ 0.89
APAF1O14727 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
APAF1O14727 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
APAF1O14727 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
APAF1O14727 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
APAF1O14727 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
APAF1O14727 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms